Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2514 ATGTTGGAGGATACTACTCCAATGACACAAGCCACAGCAGCTCGGATCTATGGAGATAAATGTGCCTTCATTGGTTGTGGATTTCGAGGGGTGCAAGACACCTTATATGATCAGTATGGTCGCCATTATTACAGTAATTGCTACATTCAAGGTGGAATTGATTTCATATTTGGGAATGAGTATACATTGATGTGTAAATACAGATCAGGCATCACATTTGTGGAGGAGGGAAACAGAGGACCAGGGGCAAATAAGTCCGAACGTGTGAAATGGATGAAACACTTAAGTGGAGCTGAACTTGATCGCTTCCTAAATATTTCTTATATTGATGAAGAAGGGTGGATTGCAAATTTGCCATTCAATATCTCATCTCACTCACACCTATTATAG 390 0.4026 MLEDTTPMTQATAARIYGDKCAFIGCGFRGVQDTLYDQYGRHYYSNCYIQGGIDFIFGNEYTLMCKYRSGITFVEEGNRGPGANKSERVKWMKHLSGAELDRFLNISYIDEEGWIANLPFNISSHSHLL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2514 129 Gene3D - 3 66 IPR012334 -
Aed7g2514 129 SUPERFAMILY Pectin lyase-like 9 121 IPR011050 -
Aed7g2514 129 Pfam Pectinesterase 9 63 IPR000070 GO:0030599|GO:0042545
Aed7g2514 129 PANTHER PECTINESTERASE 68 120 - -
Aed7g2514 129 PANTHER PECTINESTERASE 6 61 - -
Aed7g2514 129 Gene3D - 67 126 IPR012334 -
Aed7g2514 129 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 68 120 - -
Aed7g2514 129 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 6 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2514 Aed-Chr7 26849059 26850305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2514 10 63 Carbohydrate Esterase AT1G05310 66.667 6.13e-21 84.7