Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2512 ATGAGTATTGTGTATAGTCATGCTGTGAAGTATTCTCAAGGTGAGACAAGGATGAACCCAGAAATGGATTCAAACATTGGTCAACATTGTCACCAACAAAATTCTGGACTAATGAGATACCGTTCTGCTCCAACCTCATTGCTCAATAGCCTTGTGACAAACAACAACAACAACAACAACATTGGTTGTGTCAATGGTGAAGCTTTCAGAAATAATCATAATCATCATCAGCAACACTATCCACCCTCCACAAGTTCTGAAATGGAGACCATGTTGGCCAAGTTGCTTTCTTCCAACAACTCTGACACTTTGCAAGTGAAGGAAGAAGCAGGGGACTCTGTTTCACAGCCACCACAACAACACAATGGTTACTCTTATGGGTCTTCACCTCAGATAATGTACCAACCTCAACAAATTCAAGGCTTGGCTTCAGGGAATGCTTTTGATGGCTCATTCAGTGCAGTGAATAATTCCATTGCTTCACAGAACTCCACACAACCTAAAATGGGTGCTTCCGCCAATTGCTCCAATCTCATTAGGCAAAAGAGTTCCCCTGCTGGTTTTTTCAACAATTACTCAGTTGATAATGCAAGTTTTAGGGGCTGTGATGGCTCAAATGGACAAGCTATTACATCCTCAAGTGGGTTGCATGGTGGTACTATGAACTTCTCATCTAGGCCATCCTCTTGCTCCTCCAGGATGCCACAGATTGCTGAAAATGGAAATGAAGATTTTGGATATCAAAAAGTTGGTTTGACCCACCATTTGAGTCTACCTGCCTCTTCTAGTAGGATGGCTACAATGGACAAGTTTTATCAAATTCAAGGATCTGTTCCATGTAAAATTCGTGCCAAGAGAGATGCAATTTCCTCTTGGCAGCAAACAAGCACAGCAGATATGTTGGATGTGGCAGTTGAGTACATTAAAGACTTGCAGAAACAAGTTAAGATGCTTAAAGATACTAGGGCAAAGTGCACTTGTAAAAGCAATCATAAGCACTGA 1002 0.4152 MSIVYSHAVKYSQGETRMNPEMDSNIGQHCHQQNSGLMRYRSAPTSLLNSLVTNNNNNNNIGCVNGEAFRNNHNHHQQHYPPSTSSEMETMLAKLLSSNNSDTLQVKEEAGDSVSQPPQQHNGYSYGSSPQIMYQPQQIQGLASGNAFDGSFSAVNNSIASQNSTQPKMGASANCSNLIRQKSSPAGFFNNYSVDNASFRGCDGSNGQAITSSSGLHGGTMNFSSRPSSCSSRMPQIAENGNEDFGYQKVGLTHHLSLPASSSRMATMDKFYQIQGSVPCKIRAKRDAISSWQQTSTADMLDVAVEYIKDLQKQVKMLKDTRAKCTCKSNHKH 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2512 333 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 241 286 - -
Aed7g2512 333 MobiDBLite consensus disorder prediction 105 130 - -
Aed7g2512 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 270 327 IPR036638 GO:0046983
Aed7g2512 333 Gene3D - 263 332 IPR036638 GO:0046983
Aed7g2512 333 CDD bHLH_AtbHLH_like 281 318 IPR045239 -
Aed7g2512 333 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 241 286 - -
Aed7g2512 333 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 26 244 - -
Aed7g2512 333 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 293 330 - -
Aed7g2512 333 Coils Coil 308 328 - -
Aed7g2512 333 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 26 244 - -
Aed7g2512 333 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 293 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2512 Aed-Chr7 26842712 26847391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2512 22 317 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 29.688 3.34e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2512 - - gmx:100797629 392.119