Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2509 ATGATTGAAGGTACTTGTGGAATACTTCAAAATCGCTGTAGATTGCTTTTTTGCTATATGGTTTGTTGTTGGAAATGTATGGATTTTGGAGGACATTCATCTGCTGATCAAGCACCTAACTTGTACAGATTATGTGTAGTATTTCTTACTTTTAGCTGTATCGGTTATGCTATGCCCTTCATTCTATGTGCAACAATTTGTTGCTGCCTGCCTTGTATAATTTCCATCCTTGGGGTTAGAGAGGATATGGCACAAACCCGAGGTGCATCCTCTAAATCGATTGATGCTCTGCCAACTTATAAGTTCAAAATGAAGAAAAATAAAAGCAAAGGGGAAATCAACTCAGCTGTTGGTGAAGGTGGAGTTGTGGCTGCAGGAACTGAAAAGGAACGTGTGATCTCTGGAGAAGATGCACTCAACCCTGGTGTTGCTGCTATTGTCAGCAACTTTTGGTTTGTTGCATCTGCCTGGCAAAGAATGAAAATGTGGTTGAAGATAAATGCATCGTGCCCCCTTTGCAAGAGCGAGGTTCGTGAGAACGTAAGAGGACCAGTCTCTTGGGAAGATGCCAACCAACATCAGGGTGAAAGCAGGGTTGAGAATGGCCTCACCAACAACACCTCAACAGGTTTTGCTTCTCATAGCTCACAAAGTTTCAGTTGGACTTTGATGGGAGAGAAAAATGAAGAGAAACCTCATCAGGTTCAGGTATTGCCTCTCTCTCTTATTCCTTCTACTTGTAAGATTGCTGCTAATTTGGAAATATTGCGTGTGTTTCGTTTGGTGGTTGAAGAGTTGAGAAACACTTGTAATGCTTTTGAACTCTTGTTGATGGCTCACCCTACTCCTACTAACAATATTGTCATTGACATCACTGGGAGTTCTCGTGCCAATGCCAATGATGTAGATGCTTTGAATTCTAGGATCAATAATAATCATAATAATAATACATGTAGGTTGTTGAATTGGAGGTTATGGATATGTGTTGAGCTAGTGTTCACACTGAGTGTGATTGTTGCCTCTGTTGTTGTTGTTCTGTCTTTGTCATCAAAGTATGAGCATGAGCATCCGCCACGTGGACGGCCGTTCTTTGTGTGGATTGCTGTGTATGCATTCGGCTGTGTTGCTACCCTCCCTCTTCTATTGCCATTATTATCATTGGAGCCACTTGTGGAATTCTACAAAAGTACTGTAGGGTCATTTGAAGTGTTTCTTGCTTTTATGTTTATCCGTTGTGTTATTGGGGTTAGAGATTATCTGCCAATGACACAAATCCGAGGTGCAACCCCTGAATCGATTAATACTCTGCCCACTTATAAGTTCAAAATCAAGATAATTAACAACAACTCAGCAGCTGTTGTGGTGAAGGTGGAGTTGTTGCTGCAGGAACTCAAAAGGAGAGTATCATCTCAGGAGAAGATGCAGTAA 1428 0.4146 MIEGTCGILQNRCRLLFCYMVCCWKCMDFGGHSSADQAPNLYRLCVVFLTFSCIGYAMPFILCATICCCLPCIISILGVREDMAQTRGASSKSIDALPTYKFKMKKNKSKGEINSAVGEGGVVAAGTEKERVISGEDALNPGVAAIVSNFWFVASAWQRMKMWLKINASCPLCKSEVRENVRGPVSWEDANQHQGESRVENGLTNNTSTGFASHSSQSFSWTLMGEKNEEKPHQVQVLPLSLIPSTCKIAANLEILRVFRLVVEELRNTCNAFELLLMAHPTPTNNIVIDITGSSRANANDVDALNSRINNNHNNNTCRLLNWRLWICVELVFTLSVIVASVVVVLSLSSKYEHEHPPRGRPFFVWIAVYAFGCVATLPLLLPLLSLEPLVEFYKSTVGSFEVFLAFMFIRCVIGVRDYLPMTQIRGATPESINTLPTYKFKIKIINNNSAAVVVKVELLLQELKRRVSSQEKMQ 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2509 475 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 294 381 - -
Aed7g2509 475 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 410 449 - -
Aed7g2509 475 Coils Coil 454 474 - -
Aed7g2509 475 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 294 381 - -
Aed7g2509 475 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 410 449 - -
Aed7g2509 475 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 29 193 - -
Aed7g2509 475 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 29 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2509 Aed-Chr7 26790348 26796915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2509 306 381 C3H Transcription Factor Family AT1G80400 44.156 5.74e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2509 - - gmx:100795904 260.766