Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2499 ATGAGGAAACCTGATACGATGGCCGCCAACAAGGTCGACAAAAAAATGAACAACAACAACAACGTTAATAAGAGCAAGATGCGAAAAGGGTTGTGGTCACCTGATGAAGATGAGAGGCTCATAAGGTACATGTTGACAAATGGACAAGGGTGTTGGAGTGACATTGCTAGGAATGCTGGTCTTCAAAGGTGTGGCAAGAGTTGTCGTCTTCGTTGGATTAATTACTTGAGACCTGACCTCAAGCGTGGTGCATTCTCACCCCATGAGGAAGACCTCATTGTTCATCTTCATTCCATTCTTGGCAATAGGTGGTCTCAGATTGCAGCACGTCTCCCTGGGCGCACAGACAATGAGATAAAGAATTTCTGGAACTCCACATTGAAAAAAAGGTTGAAAAGTACTAACACTTCTTCCACTACTCCCTCATCACTAAACAACAGCACAGGCTCATCAGAGTCTAACAACAAAGATGTCATGAGTGGGATCATGATGATGCCCTTTAATGAACATGATCATGACATCATGATGGCCATGTGCATGGACTCCTCTTCATCCATATCATCCATGCAGCAAGCCATGGTTTTGCCTCATGACCAAATAATACTTGACCCCTTTTCCATGTGTGATGGCATGACCAATAATAATGTTTCATCAGATTTTCCCAACATGCCTCAAATTGATGATCATCAAGGGAATTATGTGATATTGGAGGCAAATAAAATGGGGTTTAGAAGAGGAGACTTCTCCTCCCTTCCTCCTTCACTAGAAAGTAGAAGAAGCATTGTTGATCAAAGCAATAGTAGTGTCCCAATTGTTGATGTGAAAAGCCATCACAACAACCACTTCAATTATGGTTCCTTCAATAACACTGATAAGATTCAGGGCTCCTCCAAAGTAGAGGACTTCATTGGGTTTGGAAATCATGGCCAAGGAGAAAATTTAAAGATTGGAGGAGAGTGGGATTTGGAGAATTTGATGCAAGACATAACCTCTTTTCCTTTCCTTGATTTTTAA 1014 0.4172 MRKPDTMAANKVDKKMNNNNNVNKSKMRKGLWSPDEDERLIRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPHEEDLIVHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRLKSTNTSSTTPSSLNNSTGSSESNNKDVMSGIMMMPFNEHDHDIMMAMCMDSSSSISSMQQAMVLPHDQIILDPFSMCDGMTNNNVSSDFPNMPQIDDHQGNYVILEANKMGFRRGDFSSLPPSLESRRSIVDQSNSSVPIVDVKSHHNNHFNYGSFNNTDKIQGSSKVEDFIGFGNHGQGENLKIGGEWDLENLMQDITSFPFLDF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2499 337 SUPERFAMILY Homeodomain-like 27 123 IPR009057 -
Aed7g2499 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 131 IPR017930 -
Aed7g2499 337 CDD SANT 84 127 IPR001005 -
Aed7g2499 337 Pfam Myb-like DNA-binding domain 82 126 IPR001005 -
Aed7g2499 337 Pfam Myb-like DNA-binding domain 29 76 IPR001005 -
Aed7g2499 337 MobiDBLite consensus disorder prediction 12 27 - -
Aed7g2499 337 CDD SANT 32 76 IPR001005 -
Aed7g2499 337 ProSiteProfiles Myb-like domain profile. 24 76 IPR001005 -
Aed7g2499 337 Gene3D - 83 158 - -
Aed7g2499 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 76 IPR017930 -
Aed7g2499 337 PANTHER TRANSCRIPTION FACTOR MYB83 16 337 - -
Aed7g2499 337 MobiDBLite consensus disorder prediction 131 158 - -
Aed7g2499 337 PANTHER MYB DOMAIN PROTEIN 55 16 337 - -
Aed7g2499 337 SMART sant 81 129 IPR001005 -
Aed7g2499 337 SMART sant 28 78 IPR001005 -
Aed7g2499 337 Gene3D - 20 81 - -
Aed7g2499 337 MobiDBLite consensus disorder prediction 1 29 - -
Aed7g2499 337 ProSiteProfiles Myb-like domain profile. 77 127 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2499 Aed-Chr7 26691889 26693788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2499 1 337 MYB Transcription Factor Family AT3G08500 47.293 1.63e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed7g2499 Myb_DNA-binding 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2499 K09422 - gmx:100784755 423.32