Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2494 ATGGAGTCAGAAGGGGAGGCTGGGGCAAAGCCAGTGACAGCATTGGGTGCACAAGTGTGCCAGATTTGTGGTGATGGTGTTGGGAAGACTGTGGATGGTGAACCGTTCATCGCATGTGATGTTTGTGCTTTTCCTGTCTGCAGGCCTTGCTATGAGTATGAAAGGAAGGATGGGAATCAGTCTTGCCCCCAGTGCAAAACCCTGTATAAGAGGCACAAAGGAAGTCCTGCAATTCTTGGAGAAGGGGAAGAGGATGGCGCTGCTGCTGATGGTGCCAGTGATTTCAATTATGATTCAGAAAATCAAAATCAAAATCAAAACCAAAAGCAGAAGATTTCAGAGCGCATGTTGAGCTGGCAATTGACATATGCACATGGAGAGGAGGTTGGTGCTCCAAATTATGATAAGGATGTTTCTCACTCTCACAACCACATTCCTCTGCTGACCAGTGGACAAGAGATATCTGGAGAGTTGTCTGCAGCCTCACCTGAGAGGCTCTCAATGGCATCTCCTGCAGTTGGTGGCGGAAAGCGTGTCCATAATATTCCATATTCATCTGACATCAATCAATCTCCAAATATCAGGGCCGGGGATCCAGGATTGGGTAATGTTGCGTGGAAAGAAAGAGTTGATGGCTGGAAGATGAAGCAAGATAAGAATGTTGTTCCAATGAGCACAGGCCAGGCTGCTTCTGAAAGAGGAGGTGGAGATATCGATGCTAGTACTGATGTGCTCGTGGATGATTCTTTGTTGAATGATGAAGCTCGACAGCCTCTTTCCAGGAAGGTTTCTATTCCTTCCTCTAGGATAAATCCATATCGTATGGTCATTATGCTGCGGCTGCTTATCCTTTGCATTTTCTTGCATTATCGGATAACGAATCCAGTGCTCAATGCATATCCATTGTGGTTGGTATCGGTTATATGTGAGATTTGGTTTGCCATATCTTGGATATTGGATCAATTTCCCAAGTGGCTTCCTGTAAACCGTGAAACATATCTCGACAGGCTTGCACTGAGGTATGATCGGGAAGGAGAACCGTCACAGCTAGCTGCTGTTGACATTTTTGTCAGTACTGTTGATCCATTAAAGGAGCCCCCACTTGTGACTGCCAATACTGTACTATCTATTCTTGCAGTTGACTATCCAGTGGATAAGGTCTCCTGCTATGTGTCTGATGATGGTGCTGCTATGTTGACATTTGAAGCACTTGCCGAGACATCAGAATTTGCAAGGAAATGGGTTCCTTTTAGTAAGAAGTATAGCATTGAACCCCGTGCACCTGAGTGGTATTTTGCTCAAAAGATTGACTACTTGAAAGATAAGGTTCATCCATCATTTGTCAAGGATCGTAGAGCAATGAAGAGAGAATATGAGGAATTTAAAGTTCGCATTAATGGACTTGTTGCTAAGGCAGCGAAAGTTCCTGAAGAAGGATGGGTGATGCAAGATGGTACCCCGTGGCCTGGAAATAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGACACTGAGGGTAATGAACTTCCGCGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGGTTCCAACATCACAAGAAAGCCGGTGCCATGAATGCACTTGTTCGAGTATCTGCAGTCCTTACCAATGGACCTTTCTTATTGAATCTCGATTGTGATCACTACATAAACAACAGCAAGGCCTTGAGGGAAGCTATGTGCTTTATGATGGATCCTAACCTTGGTAAACATGTTTGCTATGTTCAGTTTCCACAGAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAATCGTAATACAGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGTCCTGTTTATGTCGGTACTGGATGCGTCTTCAATAGGACAGCTTTATATGGTTATGAACCTCCTCTTAAACCCAAGCATAAAAAGCCTGGGTTCTTATCATCACTCTGTGGTGGAAACCGGAAGAAGAGTTCAAAATCTAGTAAGAAAGGATCAGACAAGAAAAAATCTAGCAAGAATGTTGACCCAACTGTTCCCATTTTCAACCTAGAGGATATAGAAGAAGGAGTAGAAGGATGGATTTATGGTTCTGTCACAGAAGATATTCTTACTGGATTTAAGATGCATGCCCGCGGTTGGCGGTCTATATACTGCATGCCCAAGCGCCCAGCATTTAAAGGTTCGGCTCCCATCAATCTTTCAGATCGTCTAAACCAAGTGCTTCGATGGGCTTTAGGTTCCGTGGAGATTCTTTTTAGTCGGCATTGTCCCATCTGGTATGGTTATGGTGGAAGGCTAAAGTGGCTTGAAAGCATATGGTTCATTTCCCTCTTTCTCTCCATCTTTGCTACTGGAATCCTGGAGATGAGGTGGAGTGGTGTTGGAATCGACGAGTGGTGGAGGAACGAGCAGTTTTGGGTCATCGGCGGTGTCTCGGCGCATCTCTTTGCCGTCTTCCAAGGCCTGCTCAAAGTGCTTGCTGGAATCGACACCAACTTCACCGTGACCTCCAAGGCCTCGGATGAAGATGGAGACTTTGCTGAGCTCTACATGTTCAAATGGACCACCCTACTCATCCCTCCAACAACCCTTCTCATAATAAACTTGGGGGGGGTGGTTGCCGGCATCTCCTACGCCATCAACAGCGGCTACCAATCTTGGGGACCACTCTTTGGTAAGCTTTTCTTTGCATTTTGGGTGATCATTCATCTATACCCTTTCCTCAAAGGTCTCATGGGGCGCCAGAACAGAACACCAACCATTGTGGTGGTGTGGTCCGTTCTTCTTGCATCCATTTTCTCTCTCTTGTGGGTTAGAATTGATCCTTTCACCACAAGGGTCACTGGCCCTGATGTTGAGGAATGTGGCATTAACTGCTAG 2913 0.4542 MESEGEAGAKPVTALGAQVCQICGDGVGKTVDGEPFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTLYKRHKGSPAILGEGEEDGAAADGASDFNYDSENQNQNQNQKQKISERMLSWQLTYAHGEEVGAPNYDKDVSHSHNHIPLLTSGQEISGELSAASPERLSMASPAVGGGKRVHNIPYSSDINQSPNIRAGDPGLGNVAWKERVDGWKMKQDKNVVPMSTGQAASERGGGDIDASTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIMLRLLILCIFLHYRITNPVLNAYPLWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRINGLVAKAAKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGFLSSLCGGNRKKSSKSSKKGSDKKKSSKNVDPTVPIFNLEDIEEGVEGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLESIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINLGGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTTRVTGPDVEECGINC 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2494 970 MobiDBLite consensus disorder prediction 654 684 - -
Aed7g2494 970 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 693 - -
Aed7g2494 970 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 474 644 IPR029044 -
Aed7g2494 970 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 780 970 - -
Aed7g2494 970 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 702 781 - -
Aed7g2494 970 MobiDBLite consensus disorder prediction 76 112 - -
Aed7g2494 970 CDD mRING-HC-C4C4_CesA_plant 18 68 - -
Aed7g2494 970 SUPERFAMILY Nucleotide-diphospho-sugar transferases 367 795 IPR029044 -
Aed7g2494 970 PANTHER CELLULOSE SYNTHASE 780 970 - -
Aed7g2494 970 SUPERFAMILY RING/U-box 5 88 - -
Aed7g2494 970 Pfam Cellulose synthase 782 963 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed7g2494 970 Pfam Cellulose synthase 353 702 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed7g2494 970 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 94 IPR013083 -
Aed7g2494 970 MobiDBLite consensus disorder prediction 95 112 - -
Aed7g2494 970 PANTHER CELLULOSE SYNTHASE 5 693 - -
Aed7g2494 970 PANTHER CELLULOSE SYNTHASE 702 781 - -
Aed7g2494 970 Pfam Zinc-binding RING-finger 10 86 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2494 Aed-Chr7 26628128 26635542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2494 10 970 Cell Wall Biosynthesis AT5G17420 62.216 0.0 1264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2494 K10999 - fve:101296424 1601.65