Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2484 ATGGCTTACCCCCATCATGATGACACCCTATACTGCTCCGAAGAGGTGGAGGAATACGGTGATAATAGTAATAGTAGCACCATAATAAACAAGTCCCCTGAGTCTGAGTTGGTCGAAAGTGACATGTTTTGGGACGAACAGGAGTTGACATCGCTGCTGGTGAAAGAACAACACAACCCACTAATTAGCACCTGTCTCCAAAGCAACCGCAGAGAAGCCGTGGAGTGGATTCTCAAAGTGAACGCCCACTACTCCTTCTCCGCCCTCACTGCTGTTCTTGCGGTCAACTACTTTGACCGCTTTCTCTTCAGCTTCCGCTTTCAGAATGACAAGCCTTGGATTACTCACCTCGCTGCTGTCGCTTGCCTCTCCCTCGCTGCCAAAGTGGAGGAGACACAAGTTCCCTTTCTTCTTGACCTTCAACAAGTATATATGAGTAGATACTTGTTCGAAGCCAAAACCATTAAAAGGATGGAGATTTTGGTTCTTTCCACTCTTGAATGGAAGATGAACACGCCAACTCCTCTCTCGTTTCTTGATTACATCACAAGAAGACTTGGATCCAAAGATCATCTCTGCTGGGAGTTCCTCAGGATGTCTGAACGCGTTCTTCTCTCTGTCCTTGGAGATTCGAGGTTTATGAGTTATCTACCTTCTGTATTGGCAACTGCTACAATGATGCACGTTGTGAAAAGCGTGAAGCCTCATCTAGAAGCTGAATACCAAAGCCAAGTCTTTAGTATTCTCAGAATCGACAAGGAGAAGGGTGAGAAGGTAAATTCGTGTTGGAAGCTGATGGTGGCAATGTGGTCAGGGTACGAGTACGAGGAGAACATGAAACGCAAGTTTGGGAATGGATGCATTCCTCCTCCAGGAAGCCCAAACGGCGTGATGGAAGTGTCGTTTAGCTGTGATAGCTCCAATGACTCGTGGGCCGTGTCTTCTTCACCGGAACCTTTGTCGAAGAAGAGTAGGAGTGAAGAGCAGCTAGTTCTACCAGATGGACTTTAA 1011 0.4688 MAYPHHDDTLYCSEEVEEYGDNSNSSTIINKSPESELVESDMFWDEQELTSLLVKEQHNPLISTCLQSNRREAVEWILKVNAHYSFSALTAVLAVNYFDRFLFSFRFQNDKPWITHLAAVACLSLAAKVEETQVPFLLDLQQVYMSRYLFEAKTIKRMEILVLSTLEWKMNTPTPLSFLDYITRRLGSKDHLCWEFLRMSERVLLSVLGDSRFMSYLPSVLATATMMHVVKSVKPHLEAEYQSQVFSILRIDKEKGEKVNSCWKLMVAMWSGYEYEENMKRKFGNGCIPPPGSPNGVMEVSFSCDSSNDSWAVSSSPEPLSKKSRSEEQLVLPDGL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2484 336 SUPERFAMILY Cyclin-like 43 171 IPR036915 -
Aed7g2484 336 PANTHER CYCLINS 24 325 IPR039361 -
Aed7g2484 336 Pfam Cyclin, C-terminal domain 173 272 IPR004367 -
Aed7g2484 336 MobiDBLite consensus disorder prediction 305 336 - -
Aed7g2484 336 Gene3D - 65 171 - -
Aed7g2484 336 PANTHER CYCLIN D3.1 PROTEIN 24 325 - -
Aed7g2484 336 SMART Cyclin_C_2 173 306 IPR004367 -
Aed7g2484 336 SMART cyclin_7 75 164 IPR013763 -
Aed7g2484 336 Gene3D - 172 263 - -
Aed7g2484 336 SUPERFAMILY Cyclin-like 174 273 IPR036915 -
Aed7g2484 336 CDD CYCLIN 69 163 IPR013763 -
Aed7g2484 336 MobiDBLite consensus disorder prediction 305 320 - -
Aed7g2484 336 Pfam Cyclin, N-terminal domain 66 171 IPR006671 -
Aed7g2484 336 ProSitePatterns Cyclins signature. 70 101 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2484 Aed-Chr7 26535209 26537385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2484 8 333 Core Cell Cycle Gene Families AT5G67260 48.433 9.96e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2484 K14505 - gmx:100795892 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0351 6 3045142 3047012 Aed7g2484 7 26535209 26537385 PCT