Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2475 ATGGAAGAAGAAGTAGGTAGTTTAGGAGTTTGTTGTTCGACGAGCGCGAAACGGAAGCAACAAGATAAGCCATACAGAGGAATAAGGATGAGAAAGTGGGGAAAGTGGGTGGCGGAGATTAGAGAACCCAACAAGAGGTCCAGGATCTGGTTGGGTTCTTACGCCACCCCTGTCGCCGCTGCACGCGCCTACGACACCGCCGTCTTCCACCTCCGAGGCCCTTCCGCTCGCCTCAACTTCCCCGAATTGCTCTCCCAAGAACAACAAGGTGGCGGTGCCAACAAAATGTCCGCAGATTCAATTCGCAAAAAAGCCACCCAAGTCGGCGCCAGAGTCGATGCGCTCCAAACGGCGCTTCAAGTTCAACAATCCTCCTCCTCGTCTAATTCAAGCCACGTCACCTTTGATGACAAACCAGACCTGAACGAGTATCCCAAACCTGAAGATTAA 450 0.5244 MEEEVGSLGVCCSTSAKRKQQDKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYATPVAAARAYDTAVFHLRGPSARLNFPELLSQEQQGGGANKMSADSIRKKATQVGARVDALQTALQVQQSSSSSNSSHVTFDDKPDLNEYPKPED 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2475 149 MobiDBLite consensus disorder prediction 119 149 - -
Aed7g2475 149 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Aed7g2475 149 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Aed7g2475 149 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Aed7g2475 149 Pfam AP2 domain 25 73 IPR001471 GO:0003700|GO:0006355
Aed7g2475 149 MobiDBLite consensus disorder prediction 82 106 - -
Aed7g2475 149 Gene3D AP2/ERF domain 24 82 IPR036955 GO:0003700|GO:0006355
Aed7g2475 149 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 16 149 - -
Aed7g2475 149 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 16 149 - -
Aed7g2475 149 CDD AP2 25 83 IPR001471 GO:0003700|GO:0006355
Aed7g2475 149 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Aed7g2475 149 PRINTS Ethylene responsive element binding protein signature 63 83 IPR001471 GO:0003700|GO:0006355
Aed7g2475 149 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2475 Aed-Chr7 26451582 26452031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2475 18 149 AP2-EREBP Transcription Factor Family AT2G23340 57.432 2.54e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed7g2475 AP2 2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2475 K09286 - gmx:100801528 225.328