Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2474 ATGGGCTGCAGCATGAAGGTGCATCAGTTCACACGTGGATTGATCTGGGAGCACGAACCTTTCCTCACACTTGGTTGCAGCAAGAGATTACGCCCTCTTGCTCCCCAAACCCCTTCCGTTCCTTTCGATCTCAAGAGCTTCATCAGGCCAGAAAGTGGCCCCAGAAAACCCGTTTCCTCTTACGACGACGACACTACTAATAAGAAAGATCCACCTTCACCCCAAGCCCAGGTAGTTGAAACAACGCATCCAGGAGGGACACGGTGGAATCCAACGCAGGAACAGATAGGGATATTGGAGATGCTGTACAAAGGAGGGATGCGAACTCCAAATGCTCAGCAGATAGAGCAGATCACACTCCAGCTTGGAAAGTACGGCAAGATCGAAGGGAAGAACGTCTTCTATTGGTTTCAGAACCACAAAGCACGCGAGAGACAAAAGCAGAAGCGCAACACCCATCACACTACTGTTGTTACTTTGAAGGGGGACGAGGTGGAAGATAGTCCGTACAAGAAAAAGTGTAGGAGATGGGTATTTCAGTGCTTCCAAGACGACAAAAACATGTCATTACAAGAGGAACATACAACTCTCCAGCTTTTTCCATTGCACCCGGAAGGCAGATCAAAGGGTTTCACTTAA 639 0.4851 MGCSMKVHQFTRGLIWEHEPFLTLGCSKRLRPLAPQTPSVPFDLKSFIRPESGPRKPVSSYDDDTTNKKDPPSPQAQVVETTHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEQITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNTHHTTVVTLKGDEVEDSPYKKKCRRWVFQCFQDDKNMSLQEEHTTLQLFPLHPEGRSKGFT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2474 212 MobiDBLite consensus disorder prediction 41 91 - -
Aed7g2474 212 SUPERFAMILY Homeodomain-like 82 151 IPR009057 -
Aed7g2474 212 MobiDBLite consensus disorder prediction 70 91 - -
Aed7g2474 212 SMART HOX_1 84 151 IPR001356 GO:0003677
Aed7g2474 212 Pfam Homeodomain 87 146 IPR001356 GO:0003677
Aed7g2474 212 ProSiteProfiles 'Homeobox' domain profile. 82 147 IPR001356 GO:0003677
Aed7g2474 212 Gene3D - 87 153 - -
Aed7g2474 212 CDD homeodomain 87 148 IPR001356 GO:0003677
Aed7g2474 212 PANTHER WUSCHEL-RELATED HOMEOBOX 4 5 207 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2474 Aed-Chr7 26439942 26441053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2474 5 151 Wox Gene Family AT1G46480 61.677 4.03e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aed7g2474 Homeodomain 1.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2474 - - gmx:100781015 318.161