Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2470 ATGGCTACCCCTGTCGTTCGACGCATTTCAGAATGCTTCGTCAAACCACATGGTTTAACCGAAGTGTCAAACCAAATGTGTCACTTAACCCATTGGGACATTGTTATGTTGTCTGTGCACTATATCCAGAAGGGTCTACTCTTCAAGAAACCTACTGCAGCACTTGTTGATCAACATGATTTCATAGAGAATCTGTTGGAGAAACTGAAACACTCTCTTTCTCTCACCCTCTTCCATTTCTATCCATTGGCTGGCCGCCTTGTAACCCAGAAATCCCAAGACCCTCCCTCCTATTCTGTTTTCGTTGATTGCAACAACGACAGTGATGGAGTCAAATTCATCTATGCAACTTTGGACCTGACCATTTCTGACGTACTCTCTCCCGTTGATGTCCCACCCATTGTTCAGTCATTCTTTGATCATCATAAAGCAGTCAACCATGATGGTCACACCATGCCCTTGTTGTCCATCCAAGTCACTGAACTAGTGGATGCTGTTTTCTTAGGTTGTTCCATGAATCACTCTGTCGGTGATGGCACTTCTTATTGGAACTTCTTTAACACATGGTCTGAGATCTTTCAATCTCAAGCTCAAGGAAGGCATGGAAGTGAAGTTCCCAATATTTCACACCAACCCATTCACAATCGCTGGTTTCCAAAAGATTGCAATCCAGTGAATCCACCAATAAATCTTCCTTTCAAACATGAGGACGAGTTTATAAGCAGATTTGAAGCACCCATGCTGAGAGAGAGAGTCTTCCAGTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAAGGCCAACTCAGAGTCCAATACCACAAAAATCTCTTCATTCCAGTCACTATCAGCACATGTTTGGAGATGCATAACTCGTGCATGCTCCCTACCATATGAGAAAAGAACAAGTTGCAGGTTAACCGCAAACAATCGATCAAGAATGGAACCACCTCTGCCTTATGAGTACTTCGGAAACTCAGTTCATAGGTTGATTGTAGAAACAACAGTAGGGAAATTACTTGAGAATGATCTAGGATGGGCAGCATGGAAGGTGCACCTGGCTGTTACAAACCACAACGACAAAGTGGTGCTGCAATCACTCAAAGAGTGGTTAGAATCTCCTTTAATCAATCATCTTGGTCAGCCCATGGACCCTTACGTTGTGATGATAAGTAGCTCACCGAGGTTCAACATGTATGGGAATGAGTTTGGAATGGGAAAAGCAGTGGCAGTTAGAAGTGGTTATGCCAACAAGTATGAGGGAAAAGTGACATCATACCCAGGGAGTGAAGGAGGTGGTAGCATTGATTTGGAGGTCTGCCTTTTACCACATATAATGAGCGCTCTGGAATCAGACAAGGACTTTATCAATGCACTTTCTGTTTAA 1386 0.4322 MATPVVRRISECFVKPHGLTEVSNQMCHLTHWDIVMLSVHYIQKGLLFKKPTAALVDQHDFIENLLEKLKHSLSLTLFHFYPLAGRLVTQKSQDPPSYSVFVDCNNDSDGVKFIYATLDLTISDVLSPVDVPPIVQSFFDHHKAVNHDGHTMPLLSIQVTELVDAVFLGCSMNHSVGDGTSYWNFFNTWSEIFQSQAQGRHGSEVPNISHQPIHNRWFPKDCNPVNPPINLPFKHEDEFISRFEAPMLRERVFQFSAESIAKLKAKANSESNTTKISSFQSLSAHVWRCITRACSLPYEKRTSCRLTANNRSRMEPPLPYEYFGNSVHRLIVETTVGKLLENDLGWAAWKVHLAVTNHNDKVVLQSLKEWLESPLINHLGQPMDPYVVMISSSPRFNMYGNEFGMGKAVAVRSGYANKYEGKVTSYPGSEGGGSIDLEVCLLPHIMSALESDKDFINALSV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2470 461 Gene3D - 238 451 IPR023213 -
Aed7g2470 461 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 459 - -
Aed7g2470 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 459 - -
Aed7g2470 461 Gene3D - 2 225 IPR023213 -
Aed7g2470 461 Pfam Transferase family 20 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2470 Aed-Chr7 26422239 26423624 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2470 12 450 Monolignol Biosynthesis Gene Families AT5G48930 26.739 3.85e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2470 - - gmx:100787276 787.719