Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2467 ATGCTATCCATGCACTACATCCAGAAAGGTCTACTCTTCAAGAAACCTCCAACACTTGTTGATCAACACGATGATGATTTCATAGAGAAACTGCTGGAGAAGCTGAAGCATTCTCTTTCTCTCACCCTCTCCCATTTCTATCCGTTGGTCGGCCATCTTGTCACTCAAAAAACCACTGACCCTTCCTCTTATTCTATTTTTGTTGATTGCAACAATAGTGATGGAGCTAGATTCATCTATGCAACTTTGGATATGACCATATCTGATATACTCTCCCCAATTGACATCCCACCCATTGTTCAGTCATTCTTTGACCACCACAAAGCAGTCAACCATGATGGTCACACCATGCCCCTGTTGTCCATTAAAGTCACTGAACTAGTAGATGGTGTTTTCATAGGCTGTTCTATGAACCATACCATAGGTGATGGGACTTGTTATTGGAATTTCTTCAACATTTGGTCTGAGATTTTTCAATTTCAAGATCGAGGCAATGAATATGATGTTCCCATCTCACGCCACCCCATTCATAATAAGTGGTTTCCAGATGGTTGTGGTCCATTAATCAATCTTCCCTTCAAACACCATGAGGAGTTTATTAGCAGATTTGAATCACCTAAGCTGAGAGAGAGATTCTTCCAGTTTTCAGCAGAGTCCATTGCAAAACTGAAAGCAAGGGCCAACTCTGAGTCCAGAGTCACAAAAATCTCATCGTTCCAATCCTTATCAGCACATGTTTGGAGATCCGTAACACGTGCACGGCAGCTGCCACATGAAGAGATAACAAGTTGCAAATTGGCGTTAAATAATCGATCAAGAATGGAACCGCCTCTGGCACAAGAGTACTTTGGAAACGCAGTTGATGTGGTGAGTACTGCAGGGACCACGGCAGGGGAATTGCTTGAGAACGATCTAGGATGGGCGGCATGGAAAGTGCACATGGCTGTTTCAAAGCAAAACGACAGAGCGGTGCGAGACATGCTGAAAGGATGGTTAGAACGACCTGTCGTGTACCAACTTGGTGTGCACTTTGATCCTTGCAGTGTGACGGTGTCGAGTTCGCCCAGGTTCAACATGTATGGGAATGAGTTTGGGATGGGGAAAGCGGTCGCAGTTAGAAGTGGTTATGCCAACAAATTTGATGGGAACGTGACAGCATACCAAGGATGTGAGGGAGGCGTGGATTTGGAAATATGTCTTTCGCCTGATGCGATGAGCGCGCTGGAATCAGATCAGGACTTCATGGAAGCTGTTTCTCTACCCTAG 1266 0.4487 MLSMHYIQKGLLFKKPPTLVDQHDDDFIEKLLEKLKHSLSLTLSHFYPLVGHLVTQKTTDPSSYSIFVDCNNSDGARFIYATLDMTISDILSPIDIPPIVQSFFDHHKAVNHDGHTMPLLSIKVTELVDGVFIGCSMNHTIGDGTCYWNFFNIWSEIFQFQDRGNEYDVPISRHPIHNKWFPDGCGPLINLPFKHHEEFISRFESPKLRERFFQFSAESIAKLKARANSESRVTKISSFQSLSAHVWRSVTRARQLPHEEITSCKLALNNRSRMEPPLAQEYFGNAVDVVSTAGTTAGELLENDLGWAAWKVHMAVSKQNDRAVRDMLKGWLERPVVYQLGVHFDPCSVTVSSSPRFNMYGNEFGMGKAVAVRSGYANKFDGNVTAYQGCEGGVDLEICLSPDAMSALESDQDFMEAVSLP 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2467 421 Pfam Transferase family 1 415 - -
Aed7g2467 421 Gene3D - 1 186 IPR023213 -
Aed7g2467 421 Gene3D - 195 410 IPR023213 -
Aed7g2467 421 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 418 - -
Aed7g2467 421 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2467 Aed-Chr7 26410432 26411697 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2467 33 375 Monolignol Biosynthesis Gene Families AT5G48930 27.493 2.71e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2467 - - gmx:100788297 685.641