Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2428 ATGGCGGTGCTGCTGAGAATGGCTCAGCCTCACAATGGCAACACCAACAACAACGCGAACCAGCACTTGGTACTCCATGACTTTCTGGGCATGAAGCCCGCCGCTGATTCCCCCAAAACCGCCGATGTTAGGTTACCGGAACCCTCCGCCTCTGCCTCCTCCGCCGGAGGACGCGCCCCCTTCTCCGCCACCTCCGACATCGCTTCCGAGAAACAGGTAGGAAATCATCTCGAGGGAGTTCCATTCTATGGCCCGAGGAGTGATTTTTCTGGCACTGAGATTAGCAACAGATTAGTGGGAAACAAGAGAAGTAATTCTGATTCCACTTTTATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGATTCCTTTCAAAACTCACATTTGATGAAGGTTCTCCGGAATGTGGCTGCTGGAGGAGAAAGGTCTAGAAGGCCCAATGAGGATGAAGTGTTACTTGGTATGCAGTCAATGAAGCCATCTTCTTCTCAGATATTTCAGCCTCCCACCGGCACTAAGATTGATGCCAATAAATGGGAACGATCTATTCTCATGAATGTTGGCCATTCCATGCAGCATCCACCGCGTGGGGCGCAATTGGCACCTTTTGTGCACCAAATGGCTTCAAGCAAGATTAGGGATACCAATGCTGGCCCTTCATTCATTTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATCAAGGGCCCGGGAATTTTAAGTTCTATAAACACAGCTGCTACAGCCACTGAGAAAATTCCATCTGCAGTGATGCTTGGTGGCAGCAGGCCAAAGCCTGGAACTAATATTATAGAATCATCCGCACCTCCAAGCAGTCAACATGGGCTAACTCCTGCCAGCCGCCAGATGACTATTTTTTATGGAGGCCAAGCTCATGTTTTTGATGATGTCCACCCTCATAAGGCAGATGTTATAATGGCTTTGGCCGGGTCAAATGGAGGATCTTGGTCCACTGCATTCTCACCTAAATCTGCTGTAAAGATGGTTAACGATGGTATCTTGCATAGTGGAGAAAATGAAACAGGTGTAGTTAGTAATGTGGCATTCCCACAGGAGCTTCATGGGAAATTGTCTGTTACTGGAAGTTCTAGCCATGCCATCGGGCCCGGGGATCGAGTAACTACTCCAGCAGGGGCACCACACCAAGGAAGTATTTTTGTGAAAGATACAAGAAATCTGGTCCAACCACCAGATCCAAGTTCTGAAGACAAAAGAGCACAGTGA 1251 0.486 MAVLLRMAQPHNGNTNNNANQHLVLHDFLGMKPAADSPKTADVRLPEPSASASSAGGRAPFSATSDIASEKQVGNHLEGVPFYGPRSDFSGTEISNRLVGNKRSNSDSTFMGSSRDAFQMVPDSFQNSHLMKVLRNVAAGGERSRRPNEDEVLLGMQSMKPSSSQIFQPPTGTKIDANKWERSILMNVGHSMQHPPRGAQLAPFVHQMASSKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSINTAATATEKIPSAVMLGGSRPKPGTNIIESSAPPSSQHGLTPASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSAVKMVNDGILHSGENETGVVSNVAFPQELHGKLSVTGSSSHAIGPGDRVTTPAGAPHQGSIFVKDTRNLVQPPDPSSEDKRAQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2428 416 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 52 415 IPR040390 -
Aed7g2428 416 PANTHER PROTEIN TIFY 8 52 415 - -
Aed7g2428 416 ProSiteProfiles Tify domain profile. 285 320 IPR010399 -
Aed7g2428 416 MobiDBLite consensus disorder prediction 369 416 - -
Aed7g2428 416 Pfam tify domain 287 319 IPR010399 -
Aed7g2428 416 MobiDBLite consensus disorder prediction 35 62 - -
Aed7g2428 416 SMART tify_2 285 320 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2428 Aed-Chr7 26151406 26159334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2428 23 318 Tify Gene Family AT4G32570 41.346 9.67e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aed7g2428 tify 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2428 - - gmx:100819293 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1113 6 15687944 15692720 Aed7g2428 7 26151406 26159334 PCT