Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2426 ATGGATAGAGTAAATAGAGTTTGTGCCAAAGATGAAGAGCGTCCACTCCGAATCACCAGAGCAAGGGCTAGAGCCTTGAGAGGGATTACTCCCTACTCAAGACCCCCCTTAAACAATGAGCAGAAGAAGAATGTGCTTCGACCAAATTCAAAAAGACCAGCAACAACTTCTGATAACAAAAGGGCAGTGCTTTCAGATGTTACAAACATTTGTGCAAAACCACATGATAAGGGTACTAAGGCATCAAAATTTCAGGCCAAAGGAGTTTACACAAAGAAAAGCACCAAGCTAGCAGCCTCAGGTGTTTCCACTGAAGTTTCATCATCACAAGAGGATGTTAGATCAAAGTTAGCTGAAGAACTATCCACAATGATGGTAGAATCAAATGACACCATAAGAGAAGGTGTTACAGCAGACACCACACATTCAAGGCAAAACTCTGTGAAATCTGATGGACTTTGGAAGTCTCCAAACAAAGACATAGATATGATTTGTGAGAAGCCAGGAGCCTCAGACTCCCTGACTATTGTGGACATAGATTCAGAATTAAAGGATCCTCAAGTTTGGAGTTCTTATGCCCCTGACATATACAGCAATATTCGAGTCACAGAGCTTGAAAGGAAACCATTGACCAACTACATGGATAAGTTGCAGAAAGATATTAATCCAAGCATGCGCGGAATTCTGGTTGATTGGCTTGTGGAGGTTTCTGAGGAATACAAGTTGGTTCCAGACACTCTCTACCTTACTGTGAACCTCATTGATCGGTACCTCTCAACAAAACTCATTCAAAAGCAAAGGCTCCAGTTGCTTGGTGTTACTTGCATGCTGATTGCATCGAAATATGAAGAGATCTGTGCACCTCGAGTGGAGGAATTTTGCTTCATCACTGATAATACATACACAAAAGAAGAGGTACTGAAAATGGAGAGAGAGATACTAAACCTTATGCATTTTCAGTTATCTGTTCCCACAATCAAAACTTTTCTCAGGAGATTCATCCAAGCAGCACAATCTTCTTACAAGGCTCCTTGTGTTGAACTGGAATTCCTGGCAAATTATTTAGCAGAGCTTGCTCTTGTTGAATGCAGCTTCTTCCAGTTTCTACCTTCCCTTGTGTCTGCATCTGCCGTGTTCCTTGCCAGATGGACCCTGAACGAGTCAGAACATCCATGGAATCCAACTCTGGAGCACTATACAAAATACAAAGCTTCAGAGCTGAAAACTGTTGTTCTTGCACTCCAAGATCTGCAACTTAATACCAAAGGCTGCTCCCTCAATGCTGTCCGCGACAAGTATAAACAACAGAAGTTCAATGGTGTGGCAAACTTGTCTCCAAAACTGGTGCCGTCACTCTTCTTCCAGGACTAA 1371 0.423 MDRVNRVCAKDEERPLRITRARARALRGITPYSRPPLNNEQKKNVLRPNSKRPATTSDNKRAVLSDVTNICAKPHDKGTKASKFQAKGVYTKKSTKLAASGVSTEVSSSQEDVRSKLAEELSTMMVESNDTIREGVTADTTHSRQNSVKSDGLWKSPNKDIDMICEKPGASDSLTIVDIDSELKDPQVWSSYAPDIYSNIRVTELERKPLTNYMDKLQKDINPSMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRYLSTKLIQKQRLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKEEVLKMEREILNLMHFQLSVPTIKTFLRRFIQAAQSSYKAPCVELEFLANYLAELALVECSFFQFLPSLVSASAVFLARWTLNESEHPWNPTLEHYTKYKASELKTVVLALQDLQLNTKGCSLNAVRDKYKQQKFNGVANLSPKLVPSLFFQD 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2426 456 Gene3D - 209 322 - -
Aed7g2426 456 MobiDBLite consensus disorder prediction 34 61 - -
Aed7g2426 456 Pfam Cyclin, C-terminal domain 324 446 IPR004367 -
Aed7g2426 456 SUPERFAMILY Cyclin-like 323 446 IPR036915 -
Aed7g2426 456 MobiDBLite consensus disorder prediction 135 153 - -
Aed7g2426 456 PIRSF Cyclin_A_B_D_E 9 452 IPR039361 -
Aed7g2426 456 Pfam Cyclin, N-terminal domain 195 321 IPR006671 -
Aed7g2426 456 PANTHER CYCLINS 42 453 IPR039361 -
Aed7g2426 456 SUPERFAMILY Cyclin-like 184 321 IPR036915 -
Aed7g2426 456 MobiDBLite consensus disorder prediction 27 61 - -
Aed7g2426 456 MobiDBLite consensus disorder prediction 135 154 - -
Aed7g2426 456 CDD CYCLIN 225 314 IPR013763 -
Aed7g2426 456 CDD CYCLIN 322 414 IPR013763 -
Aed7g2426 456 ProSitePatterns Cyclins signature. 226 257 IPR006671 -
Aed7g2426 456 Gene3D - 195 443 - -
Aed7g2426 456 SMART cyclin_7 328 416 IPR013763 -
Aed7g2426 456 SMART cyclin_7 231 315 IPR013763 -
Aed7g2426 456 PANTHER CYCLIN-A2-4 42 453 - -
Aed7g2426 456 SMART Cyclin_C_2 324 447 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2426 Aed-Chr7 26138171 26142148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2426 9 453 Core Cell Cycle Gene Families AT5G25380 53.275 1.20e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2426 K06627 - gmx:547780 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1110 6 15664045 15669990 Aed7g2426 7 26138171 26142148 PCT