Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2423 ATGGCGCACCCTACTACTCACGTGATTGACATCACGGCCGGGAGTTCTGGTTCCAATGATGATGATGTTGGTGCAGCTTCTTCGAATTCGAGTTGGTGGAATAATCCGAGGTTATGGATATGTGGTGAGGTAGTGTTCGTAGTGAGCGAGATTGTTGCGGCTTTTGTTGTTCTGTCTTTTTCGTCAAATCATGATGAGAATCCAAATCAGCGACCCTTGTATTTTTGGATTAATGTGTATGCATGGGTGTGTGTTTCTGCGCTACCTCTTCTCTGTTGGCGTTTTTATTTTCAAGACTCTCCCAATAATAACATTCATGAGTCGTGGCTCATGGACTTGCTTAGCAGTTTGGTTCTACTTCTGGATTTCTATTTAGAGAACTACTTCCTTGTTATCTGGTTTTTTGCTGGAATTTTTGTGTTCGTTTCTGGATTATTTCTAGAATCTGGTCATGAAGCGCCTGGTTTGTACTGGTTATTTAGAGTGTTTATTATTGTTATGTTTATCCGTTTGGTTATTGGGGTTAGAAAGAAACTCGCAATAATGTTCACACAAACCCCACCTCGTGAAGAAGCAACTCCTCAATGGATTAATGCTCTTCCCACTTATAAGTTCAAAATCAACAACTCAGAAGAAGGTGGAGGAGTTATTGCTGCAGGAACTGAAAAGGAGCGTATGATCTCACAAGAAGATGCAGTTTGCTGCATCTGCCTGGCAAAGTATAAAAATAAGGATGAGCTGAGAGAATTATTGGCTTGTTCTCATCTTTTTCACAAAGACTGCGTGGACATGTGGTTGAAGATAAAGGCTCTATGCCCCCTTTGCAAGAGTGGGGTTGGTGAGAATAATGTAACACTAACAGAAACCGTCGATATTGAGGCTGAGAATGCACAGGTTTTGTTTCTTAGTCATAGCTCACAAAGTTCGATCAACTTCAACTTTGAAGTTTGA 951 0.4101 MAHPTTHVIDITAGSSGSNDDDVGAASSNSSWWNNPRLWICGEVVFVVSEIVAAFVVLSFSSNHDENPNQRPLYFWINVYAWVCVSALPLLCWRFYFQDSPNNNIHESWLMDLLSSLVLLLDFYLENYFLVIWFFAGIFVFVSGLFLESGHEAPGLYWLFRVFIIVMFIRLVIGVRKKLAIMFTQTPPREEATPQWINALPTYKFKINNSEEGGGVIAAGTEKERMISQEDAVCCICLAKYKNKDELRELLACSHLFHKDCVDMWLKIKALCPLCKSGVGENNVTLTETVDIEAENAQVLFLSHSSQSSINFNFEV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2423 316 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 34 102 - -
Aed7g2423 316 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 127 291 - -
Aed7g2423 316 Pfam Ring finger domain 234 276 IPR001841 -
Aed7g2423 316 SMART ring_2 234 275 IPR001841 -
Aed7g2423 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 280 IPR013083 -
Aed7g2423 316 MobiDBLite consensus disorder prediction 1 22 - -
Aed7g2423 316 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 34 102 - -
Aed7g2423 316 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 127 291 - -
Aed7g2423 316 SUPERFAMILY RING/U-box 225 281 - -
Aed7g2423 316 ProSiteProfiles Zinc finger RING-type profile. 234 276 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2423 Aed-Chr7 26121545 26122747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2423 3 283 C3H Transcription Factor Family AT1G80400 33.811 5.64e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2423 - - gmx:100795904 202.601