Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2422 ATGAAAATTAACAACTCAGCAGCTGCTGTTGGTGAAGGTGGAGTTATTGCTGCAGGAACTCAAAAGGAGCGTATGATTTCAGGAGAAGATGCAGTTTGCTGCATCTGCTTGGCAAAGAATGAAAATAACGATAAGCTGAGAGAGTTATTGCCTTGTTCTCATCTTTTTCACAAAGACTGTGTCGACATGTGGCTGGAGATAAAGGCTCTATGCCCCATGTGCAAGAGTAATGTTACAGGAACAGTCCATGCCAACCAAAATCAGGGTCAAAATAGGAGGGTTCAGAATGGCCTCACAAATACCTCATCCTAA 312 0.4295 MKINNSAAAVGEGGVIAAGTQKERMISGEDAVCCICLAKNENNDKLRELLPCSHLFHKDCVDMWLEIKALCPMCKSNVTGTVHANQNQGQNRRVQNGLTNTSS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2422 103 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 6 93 - -
Aed7g2422 103 SUPERFAMILY RING/U-box 25 79 - -
Aed7g2422 103 Pfam Ring finger domain 33 75 IPR001841 -
Aed7g2422 103 SMART ring_2 33 74 IPR001841 -
Aed7g2422 103 ProSiteProfiles Zinc finger RING-type profile. 33 75 IPR001841 -
Aed7g2422 103 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 81 IPR013083 -
Aed7g2422 103 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 6 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2422 Aed-Chr7 26115793 26116187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2422 11 78 C3H Transcription Factor Family AT1G80400 60.294 2.40e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2422 - - gmx:100775815 142.895