Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed7g2421 | ATGGGTTTGGATTACTACAATGTGTTGAAGGTTGAGAGAAACGCTACAGAGGATGATCTGAAGAAAGCTTATAGGAAATTGGCCATGAAATGGCACCCTGACAAGAACCCCACCAACAAAAAAGAAGCTGAAGCCAATTTCAAAGAGATCGCTGAGGCTTACGAGGCAAGAAACAAGAAACCAATGTCTGTTTTCACCTCTTTGTTTCTTACTAATGTACTGAGCGATCCACAGAAAAGGGTGGTTTATGATCAGTATGGAGAGGAAGGGTTGAAAGATAGGCCACCACCTGAGAATGAACCAGAATGGAGATCAAGTGGGTTCAATCCCAGAAATGCAGAGGATATTTTTGCAGAATTCTTTGGAAGTAGCCCTTTTGGATTTGGATCATATGGGTCTGGGAGGTCCAAGAGATTCACATCTGATGGAGGCACAGCGCCGTTTGGTGGTGGATTCACTGCAAATGACAACAATTTTCGAACTTATAGTACAGGACGGGGGAATATGCCAAAGAAGCCACCACCTGTTGAGACCAAACTAGCTTGCACTTTGGAGGAGTTGTACTCTGGATCCACACGGAAAATGAAGATCTCAAGGAGTGTCGTCGATGTTAACGGGCAGGCAATTCCAGAGACAGAGATACTAACGATTGATGTGAAGCCGGGTTGGAAAAGTGGGACAAAGATAACATTTCCAGATAAAGGGAATCAGCAGCCAAATCAATTGGCGGCGGACCTCGTATTTGTGATTGATGAGAAGCCTCATGAGTTGTACAAGAGAGATGGGAACGACCTCATTGTGAGCAAAAGGGTGTCACTGGCAGAGGCCATTGGAGGAACCACAATAGATCTCACAGCACTTGATGGACGCAGTTTAAGTTTCCCAGTGAGTGACATTGTGAGCCCTGGTTACGAGATGAGTCTTGCAAATGAAGGGATGCCAATTACAAAGGAGCCTGGTCATAGGGGCGATTTGAGGATCAAATTTGATGTTAAGTTTCCGACAAGGTTGAGCCCAGAGCAACGAGCAGGACTCAAACGAGCACTGGGAACTTGA | 1056 | 0.4545 | MGLDYYNVLKVERNATEDDLKKAYRKLAMKWHPDKNPTNKKEAEANFKEIAEAYEARNKKPMSVFTSLFLTNVLSDPQKRVVYDQYGEEGLKDRPPPENEPEWRSSGFNPRNAEDIFAEFFGSSPFGFGSYGSGRSKRFTSDGGTAPFGGGFTANDNNFRTYSTGRGNMPKKPPPVETKLACTLEELYSGSTRKMKISRSVVDVNGQAIPETEILTIDVKPGWKSGTKITFPDKGNQQPNQLAADLVFVIDEKPHELYKRDGNDLIVSKRVSLAEAIGGTTIDLTALDGRSLSFPVSDIVSPGYEMSLANEGMPITKEPGHRGDLRIKFDVKFPTRLSPEQRAGLKRALGT | 351 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed7g2421 | 351 | CDD | DnaJ_C | 174 | 337 | - | - | |
| Aed7g2421 | 351 | Gene3D | - | 175 | 253 | - | - | |
| Aed7g2421 | 351 | Pfam | DnaJ C terminal domain | 176 | 334 | IPR002939 | - | |
| Aed7g2421 | 351 | SUPERFAMILY | Chaperone J-domain | 4 | 132 | IPR036869 | - | |
| Aed7g2421 | 351 | ProSiteProfiles | dnaJ domain profile. | 4 | 87 | IPR001623 | - | |
| Aed7g2421 | 351 | CDD | DnaJ | 4 | 55 | IPR001623 | - | |
| Aed7g2421 | 351 | Gene3D | DnaJ domain | 3 | 131 | IPR036869 | - | |
| Aed7g2421 | 351 | Gene3D | - | 254 | 350 | - | - | |
| Aed7g2421 | 351 | MobiDBLite | consensus disorder prediction | 86 | 107 | - | - | |
| Aed7g2421 | 351 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 258 | 343 | IPR008971 | GO:0006457|GO:0051082 | |
| Aed7g2421 | 351 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 175 | 256 | IPR008971 | GO:0006457|GO:0051082 | |
| Aed7g2421 | 351 | SMART | dnaj_3 | 3 | 79 | IPR001623 | - | |
| Aed7g2421 | 351 | Pfam | DnaJ domain | 4 | 55 | IPR001623 | - | |
| Aed7g2421 | 351 | PRINTS | DnaJ domain signature | 79 | 98 | IPR001623 | - | |
| Aed7g2421 | 351 | PRINTS | DnaJ domain signature | 42 | 62 | IPR001623 | - | |
| Aed7g2421 | 351 | PRINTS | DnaJ domain signature | 6 | 24 | IPR001623 | - | |
| Aed7g2421 | 351 | PRINTS | DnaJ domain signature | 24 | 39 | IPR001623 | - | |
| Aed7g2421 | 351 | PANTHER | DNAJ HEAT SHOCK FAMILY PROTEIN | 1 | 350 | - | - | |
| Aed7g2421 | 351 | MobiDBLite | consensus disorder prediction | 86 | 100 | - | - | |
| Aed7g2421 | 351 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 1 | 350 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed7g2421 | Aed-Chr7 | 26105588 | 26106736 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aed7g2421 | 5 | 86 | C2H2 Transcription Factor Family | AT1G74250 | 32.558 | 4.79e-07 | 49.7 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed7g2421 | K09510 | - | gmx:100796426 | 556.599 |