Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2415 ATGCACACCAAATCGACGCAGTCATCGTTTCGGGATCGGACGCACGAATTCCAGAGCATTGCGGAGAGGTTGAAGAAGACAACAGGACCAGCGCCAAATGGACAAAGCAGCAGCACTTCTTCCAGATCGGAGGAACAGCGAGCCGCAATTGCAAATCAATCAGAGTTCAATAAAAGAGCTTCCAAGATCGGCTTCGGGATTCACCAAACATCTCAGAAACTCGCCAAACTCGCCAAGTTGGCGAAAAGGACTTCGGTTTTTGACGACCCTACTATGGAAATCCAAGAGCTTACGGGGGTTATTAAGCAAGACATCACTGCTCTAAACTCTGCGGTTGTGGATCTTCAGTTACTCTTCAACTCTCGGAACGAGAGTGGAAACGCTTCCACCGACACGACTAGCCATTCCACCACGGTTGTGGATGACTTAAAGACGCGGTTGATGAGCACCACCAAAGAGTTTAAAGATGTCCTCACCATGCGAACCGAGAACTTGAAAGTGCATGAGAATAGAAGGCAGCTGTTTTCGGCCTCTGGTTCTAAGGATTCTGCAAATCCTTTTGTTCGGCAGCGGCCTTTGGCTACAAGGTCGGCTGCTAGTACTTCTAATGCCCCAGCTGCACCGTGGGCTACTGAGTCATCTTCATCTCAGTTGTTTCCTAAGAAGCAGGTGGATGGGGAGAGTCAACCATTGCTGCAACAGCAGCAAGAGGTAGTTCCATTGCAAGACAGTTACATGCAAAGCAGAGCTGAAGCTCTTCAGAATGTTGAGTCCACTATTCATGAGCTCGGTAACATCTTTAATCAACTAGCAACACTTGTTTCCCAACAAGGAGAAGTTGCCATCAGGATTGATGAAAACATGGATGATACATTGGCAAATGTAGAGGGGGCTCAAGGGGCTTTGTTGAAATATCTGAACAGCATATCTTCTAATAGGTGGCTGATGATCAAGATTTTCTTTGTATTAATATTTTTTCTTATGGTTTTCTTATTTTTTGTGGCATAG 1008 0.4603 MHTKSTQSSFRDRTHEFQSIAERLKKTTGPAPNGQSSSTSSRSEEQRAAIANQSEFNKRASKIGFGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTGVIKQDITALNSAVVDLQLLFNSRNESGNASTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFSASGSKDSANPFVRQRPLATRSAASTSNAPAAPWATESSSSQLFPKKQVDGESQPLLQQQQEVVPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEVAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2415 335 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 8 27 IPR021538 -
Aed7g2415 335 PANTHER SYNTAXIN-32-LIKE 2 334 - -
Aed7g2415 335 MobiDBLite consensus disorder prediction 29 48 - -
Aed7g2415 335 SMART tSNARE_6 238 305 IPR000727 -
Aed7g2415 335 MobiDBLite consensus disorder prediction 194 230 - -
Aed7g2415 335 SUPERFAMILY t-snare proteins 53 298 IPR010989 GO:0016020|GO:0016192
Aed7g2415 335 MobiDBLite consensus disorder prediction 1 48 - -
Aed7g2415 335 Gene3D - 49 298 - -
Aed7g2415 335 PANTHER SYNTAXIN 2 334 IPR045242 -
Aed7g2415 335 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 243 305 IPR000727 -
Aed7g2415 335 MobiDBLite consensus disorder prediction 1 22 - -
Aed7g2415 335 ProSitePatterns Syntaxin / epimorphin family signature. 249 288 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aed7g2415 335 CDD SNARE_syntaxin5 246 324 - -
Aed7g2415 335 Pfam SNARE domain 280 331 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2415 Aed-Chr7 26062419 26065698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2415 1 335 SNARE and Associated Proteins AT3G24350 63.636 2.15e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2415 K08490 - gmx:100810956 524.628