Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2414 ATGCACGTGAAATCGGCGCAGTCATCGTTCCGGGATCGGACGCAGGAATTCCACAGCATCACAGAGAGGTTGAAGAAGTCCTCCGGATCAAGGCCCAATGGGCCCACTAGCAGCACCACTTCTTCCAGATCGGAGGAACAGCGATCCGCCATCGCCAACCAATCGGAGTTCAATAAAAGGGCCTCCAAAATCGGCTTCGGGATTCACCAAACGTCTCAGAAGCTCGCCAAGCTCGCCAAGTTGGCGAAAAGTACTTCGGTTTTTGATGACCCTACGATGGAAATCCAAGAGCTTACGGGGGTGATTAAGCAGGACATCACTGCTCTGAACTCTGCGGTTGTGGATCTTCAGTTGCTGAGTCACTCTAGGAATGAGAGTGGGAATGTTTCTGCCGACACCACTAGCCATTCCACCACCGTGGTGGATGACTTGAAGACAAGGTTGATGAGCACCACCAAAGAGTTTAAGGATGTTCTCACCATGAGAACTGAGAACATGAAAGTGCACGAGAATAGAAGACAGTTGTTTTCGTCTAACACTTCTAAGGATTCTGCAAATCCTTTCATCCGGCAACGGCCGTTGGCTGCAAGGGCAGCTGCTAGTACTTCTAACCCCCCTGCTGCTCCGTGGGCTAATGGCTCACCATCTTCGTCTCAGCAGTTTCATAAGAAGCAAGTGGATGGGGAGAGTCAACCACTGTTGCAACAACAACAACAGCAGCAGCAGCAGGAGGTAGTTCCATTGCAAGATAGTTACATGCACAGCAGAGCTGAAGCACTTCAGAATGTTGAGTCCACTATTCACGAGCTTGGTAACATTTTCAATCAGCTAGCGACACTAGTTTCCCAACAAGGAGAGATTGCCATCAGGATTGATGAAAACATGGATGATACATTGGGAAACGTAGAGGGAGCACAAGGGGCTTTGTTGAAGTATCTGAACAGCATATCTTCTAATCGGTGGTTGATGATCAAAATTTTCTTTGTATTAATATTTTTCCTTACGGTTTTCTTATTTTTTGTGGCATAG 1029 0.4762 MHVKSAQSSFRDRTQEFHSITERLKKSSGSRPNGPTSSTTSSRSEEQRSAIANQSEFNKRASKIGFGIHQTSQKLAKLAKLAKSTSVFDDPTMEIQELTGVIKQDITALNSAVVDLQLLSHSRNESGNVSADTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENMKVHENRRQLFSSNTSKDSANPFIRQRPLAARAAASTSNPPAAPWANGSPSSSQQFHKKQVDGESQPLLQQQQQQQQQEVVPLQDSYMHSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTLGNVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLTVFLFFVA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2414 342 ProSitePatterns Syntaxin / epimorphin family signature. 256 295 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aed7g2414 342 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 250 312 IPR000727 -
Aed7g2414 342 MobiDBLite consensus disorder prediction 1 25 - -
Aed7g2414 342 Pfam SNARE domain 286 338 IPR000727 -
Aed7g2414 342 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Aed7g2414 342 CDD SNARE_syntaxin5 253 331 - -
Aed7g2414 342 MobiDBLite consensus disorder prediction 195 246 - -
Aed7g2414 342 MobiDBLite consensus disorder prediction 1 50 - -
Aed7g2414 342 Gene3D - 50 305 - -
Aed7g2414 342 SMART tSNARE_6 245 312 IPR000727 -
Aed7g2414 342 SUPERFAMILY t-snare proteins 54 305 IPR010989 GO:0016020|GO:0016192
Aed7g2414 342 MobiDBLite consensus disorder prediction 26 50 - -
Aed7g2414 342 PANTHER SYNTAXIN-32-LIKE 2 341 - -
Aed7g2414 342 PANTHER SYNTAXIN 2 341 IPR045242 -
Aed7g2414 342 MobiDBLite consensus disorder prediction 205 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2414 Aed-Chr7 26058009 26061754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2414 1 342 SNARE and Associated Proteins AT3G24350 65.014 5.51e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2414 K08490 - gmx:100811494 491.886