Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2408 ATGCTGTTTAACATCGGCCTCACTTCATATATAATCGGAAACATGACAAATCTCTTGGTTCTTAGCTCTGCCGGAACCTTTGCCCTGGCTTCACAGAGGGATGCCTTCAACAAAATATTACGATATGCAAACAAATATAGACTCCCAGAAGGCTTAAAGGAGCAAATGTTGGCACACATGCAATTGAAGTTTAAGACTGCAGAATTACAGCAAGAAGTGCTACAAGACCTACCTAAAACAATAAGATCCAGTATTGCTCGGCATCTTTTCCAAAACATAGTTGAAACAGCATATTTATTTAAAGGAGTCTCTGATGATTTTATCACCCAGCTGGTGTCAGAAACGAAAGCAGAATACTACCCATCTAAGGTTGACCTTATCTTGCAAAATGAGATGCCAACATATTTCTACATTTTGGTATCAGGATCACTGGATGTGTTGACATACAAGAATGGGTCCGAACAGTTTTTGTTCATACTTGAATCTGGAGACCTGGCAGGAGAAATAGGCGTGATGTTTAATATTCCACAACCGTTTACAGTGAGAAGTAGAGGGCTCTCCCAAGTCATACGAATCAATCATCACCATTTCAAGCAAATGGTGCAACCATTTAGTGATGATGGGAAGGCAATCATCTACAACTTTATTAAGTATTTGAAGGGCCACAAAGGCAAGGTGCTAGAAGAAATATATGTAACAGAATTGCTGGGTGACCTTCATGATGAGCATCTAACGCAAAATGAGGGTACACACGATGAAGTTTCAAGAAATCAAGAAGATCCATATAAAGAAGGAAGAACAGGAAATTCCAAACCACTGTCAAGCTCAGTCCCCATTAGAGTTACAATCCACGGACACCATCCCAATGAAAACAAAATGGGAAACGGACCAACACCAAAACTCATACTTCTCCCAAATTCGGTAGAAGAACTTTTCAGAGTTGCAGAGAAAAAATTCGGAAAACTCGGAAGCAAAATTCTCATGGCTGACGGCGCAGGAGTGGAAGAACTAAGCGCAATAAGGGAGAATGATGAGTTATATATCCTCTAA 1050 0.4019 MLFNIGLTSYIIGNMTNLLVLSSAGTFALASQRDAFNKILRYANKYRLPEGLKEQMLAHMQLKFKTAELQQEVLQDLPKTIRSSIARHLFQNIVETAYLFKGVSDDFITQLVSETKAEYYPSKVDLILQNEMPTYFYILVSGSLDVLTYKNGSEQFLFILESGDLAGEIGVMFNIPQPFTVRSRGLSQVIRINHHHFKQMVQPFSDDGKAIIYNFIKYLKGHKGKVLEEIYVTELLGDLHDEHLTQNEGTHDEVSRNQEDPYKEGRTGNSKPLSSSVPIRVTIHGHHPNENKMGNGPTPKLILLPNSVEELFRVAEKKFGKLGSKILMADGAGVEELSAIRENDELYIL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2408 349 SUPERFAMILY cAMP-binding domain-like 33 218 IPR018490 -
Aed7g2408 349 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 1 348 - -
Aed7g2408 349 ProSiteProfiles cAMP/cGMP binding motif profile. 99 218 IPR000595 -
Aed7g2408 349 PANTHER POTASSIUM CHANNEL AKT1 1 348 IPR045319 GO:0005249|GO:0006813
Aed7g2408 349 SMART cnmp_10 99 216 IPR000595 -
Aed7g2408 349 CDD CAP_ED 99 212 IPR000595 -
Aed7g2408 349 Pfam KHA, dimerisation domain of potassium ion channel 280 348 IPR021789 -
Aed7g2408 349 Pfam Cyclic nucleotide-binding domain 120 202 IPR000595 -
Aed7g2408 349 Gene3D Jelly Rolls 68 222 IPR014710 -
Aed7g2408 349 MobiDBLite consensus disorder prediction 243 276 - -
Aed7g2408 349 MobiDBLite consensus disorder prediction 243 266 - -
Aed7g2408 349 ProSiteProfiles KHA domain profile. 280 349 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2408 Aed-Chr7 26017631 26021233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2408 1 349 Ion Channels AT4G32650 55.056 2.04e-119 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2408 K21867 - gmx:100794620 602.438