Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2402 ATGGAGGATCAAGCGAATCAAGCGCCACCGCCGCGGGATGAAGAGGAGGATTCTAAGAAGGAGGAAGAGGAGTTAATCGCTAAGGTTAACAAACTCATGGAGAAGATAACTTCTGCGCCTGATAACCCTAACGACACCGTCCTCCACGCACTTGCTTCTATTCTTGAAGCGCAAGAGTCACGATACATGGAAGAGAGTGGTCACTCTTCCTCCACCACTGCCCGAGCTGCGCATGTCATTGGTCGCCTTGGCAGTTTAATCCGGGAAAATGACGAGTTCTTTGAGTTGATATCTTCGAAGTTTCTGTTAGAAACAAGATACTCTACTTCCATTCAAGCTGCTGCTGGCAGACTTCTTCTGTGCTGTTCCCTTACTTGGATTTATCCTCATGATTTTGAAGAATCTGTCATGGAAAATATAAAAAATTGGGTGATGGATGATAACATTGGGTTGCCTGCTGAAGGGCAGAATCTGAAGCATAATCTAGTGAAAAGGGGGGCCTCAAACTCTGAAATGTTGAAAACCTATTCTACTGGACTCCTTGCTGTGTGTTTGGACGGTGGAGGTCAACAAATAGTGGAAGACGTATTGACATCTGGCTTGTCAGCTAAGCTAATGCGTTATCTTCGTTTACGTGTGCTGGGAGAGACAAGTGGCAACCAGAAAGATGTTACTCATTTAACAGAGAGTAGGCATGCATCTGCGAATACTTCAGGGAGAAGTAGAGATGATGGTCGTGGTAGATTTCGCCAGCTCCTTGAATCTAATGCTTTAGATGATACTAGGGTGATTGATGAGAGATCTTTAGATGATGTAACTCTTGAAAGGGGTCCAGATAGAAGCATTAGTGGACAAACTTGCCAAGATGGATCTTGGATAGATGGTGAACCACCCGATGGGCTTGGGGAAGGTGCGGATGTCCACGAGGTAGATTCTGATGGGGAGGAAAGATGGCGCTGTAGAGATATACGTGATGGACGGATAAAATATGGTGAGCATGACGACAATATTAGAGATGAATCCTCAAGGCGGCGTGCAAACCGTGGATGGGGAAGATCTAGAGGGAAAAGTAGGGTCAATGAAGGGGCTGTAGAAAGTGATCCCATTTTGTCATCTCCTGGATCTGGAAGTCGATTAGGACAGGGGCGGAGTGTTAGAGATAGAAGCGTATTGAGGAATGCTGATATTAGGAGGGTGACAGATGCTAAAAAGACCCTTGGCAGGACTCCTTCTGAAGCTTCTGCTTTTGAAAGAGAAGATAATGATGATTGTTTCCAAGAGTGCCGAGTTGGAAGTAAAGATATTACTGATCTTGTTCGGAAAGCAGTCCAATCTGCTGAAGCTGAAGCTAGATCAGCCAATGCACCTGAAGAGGCTGTCAAAGCAGCTGGTGATGCTGCTGCTGACCTTGTTAAAACTGCAGCTTCTGAGGTATGCTCTGAAGCAGCCTTTTTGGCTGCTTCGAGAGCTGCATCAACTGTTATTGATGCTGCGTCTGCAGTTGAAGTTTCAAGGAGTTCTATCTGTGACAGTACCGTGACAGAGAATGTGAGTGGCAAAGAAACAGAGACTAATGAAGATGTTGAAGAGTACTTCATCCCAGACACTCAATCACTTGCACAGTTGAGGGAAAAATATTGCATTCAGTGTCTTGAGTTACTTGGAGAGTATGTAGAAGTTCTTGGCCCTGTATTGCACGAGAAGGGGGTTGATGTATGTCTTGCACTTCTGCAGCAGAATTCTAAACATTGGGAGGCATCCAAGGTTGCTTTACTGTTGCCTGATGTCATGAAGCTAATCTGTGCTTTGGCTGCACATAGGAAATTTGCTGCACTATTTGTGGACCGTGGGGGAATGCAAAAGCTGCTTGCTGTCCCCACAATGCCACAAACTTTCTTTGGCCTTTCTTCTTGTTTATTTACTATTGGTTCTCTTCAGGGAATAATGGAACGAGTTTGTGCTCTTCCATCTCAAGTTGTTTATCATGTTGTTGAGTTAGCACTCCAACTCCTTGATTGCAACCAAGACCAAGCCCGGAAGAATGCAGCATTGTTTTTTGCTGCTGCATTTGTCTTCAGAGCAGTTCTTGAGGCCTTTGATTCCCTGGATGGATTACAAAAATTACTTGGCCTTCTAAATGACGCTGCTTCGGTAAGATCAGGAGTAAATTCTGGAGCCTTGAGTTTATCTAACTCTGGATCACTTCGAAATGACCGATCATCTGCAGAAGTGCTGACATCATCTGAGAAGCAGATAGCCTATCACACTTGTGGTGCTTTGCGACAATATTTCAGAGCACATCTCCTTGTACTAGTGGATTCCATTCGTCCAAACAAAAGCAATCGTAGTGCTGCTAGAAATATTTCTAGTGTAAGGGCTGTGTACAAGCCGCTTGATATTAGTAATGAGGCAATGGATGCAGTATTCCTACAATTACAAAAGGATAGGAAGTTAGGTCCTGCATTTGTGAGAACACGTTGGCTAGCAGTTGAGAAGTTCTTGGCATCTAATGGACATATTACTATGTTGGAATTGTGTCAGGCCCCACCTGTGGAGCGATATCTGCATGATTTGCTTCAGTATGCATTGGGTGTTCTGCACATTGTTACTTTGGTACCTAGCAGTCGTAAGATGATTGTAAATGTAACATTAAGCAATAATCGTGTTGGTATTGCGGTAATTTTGGATGCTGCAAATATAGCTAGTAATCATGTGGACCCTGAGATAATTCAACCAGCATTAAATGTTTTAGTCAATCTTGTTTGCCCTCCTCCTTCAATCAGTAACAAACCAGCTATGGCTGCACAAGGTCAGCAGTTGCCATCTTCCCAAACATCTTATGGTGCTCCCTCAGAGGCTAGAGATAGAAATGCTGAACGTAATGTCTCAGATCGAACTGCTCACTCTACTAGCCAGATTGATCCTAGGGAGAGGAATGGGGAGTCCAATGCAGGATTAAGTACACAGCCTGTTAATAGCACTCCACAAACTCCTGTTGCTTCTGCAGCTTCAGCATTGGTTGGCGACCGAAGAATTTCTTTGGGTGCAGGAGCAGGCTGTGCTGGCCTTGCTGCACAACTGGAACAAGGATATCGTCAGGCAAGAGAGACTGTCCGCTCCAATAATGGTATAAAGGTTCTTCTGCATCTCCTCCAACCGCGCATATATTCACCTCCTGCTGCTCTGGACTGTCTTCGCGCTCTGTCATGTCGAGTCCTGCTTGGATTAGCTAGAGATGATACTATTGCACACATATTGACAAAGCTTCAGGTTGGGAAAAAGCTATCAGAACTGATTCGAGATTCAGGGAGCCAAACACTTGGAACAGAGCAGGGTAGGTGGCAAGCTGAACTTTCCCAGGCTGCGATTGAGCTAATTGGGATTGTGACTAATTCAGGCCGTGCAAGTACATTAGCTGCTACTGATGCAGCTACTCCTACTTTAAGGCGCATAGAAAGAGCAGCTATAGCTGCGGCCACTCCTATTACTTACCATTCAAGGGAACTACTTCTCCTAATTCATGAACACCTACAGGCATCTGGATTGGCACACACTGCTTCTATGTTGATTAAAGAAGCTCAGTTGACTCCTTTGCCATCATTGGTTCTGCCCTCTTCTCTTCCACAACAACCCACCACACAGGAAGCTTCTTCAACACCAATTCAGTGGCCCTCTGGTCGTTCTCCTTCTGGATTTCTCCTTAACAAATTAAAGTTTAACGCAAAGGATGCAGATGCAGTCTTGAAGTGTGATTCTGTCTCTGCAAAGAAAAAATCACTGACTTTCTCATCATCTTTTCATTCAAGATTTCAACTCCTCGATTCTCAGTCATCAGTCAGGAAATTGTCAAATACTGGAAAAGAGTCATCAGAAATTAGTGTGGTAGAGACTACATTCGGATCTTCAGTGAAACATAACATTGATACTGGTTCTCAGTTTAAGACTCCAATTTCCTTGCCAGCAAAACGAAAGTTATCTGATTTGAAGGATATATCAATGTTTTCATCGTCTGGGAAACGATTGAATGTTGGGGATCAAGGACTTCGCTCTCCTATTTGTTCAAGTGCAATTCGTAAAAGCAGCCTGCAGACTGATTCTGTTGGGCTTTTCACACCAACTTGTAATCTGAAACCTGGCCGATGTACGGGTGACTTGGTGGATGAGATCCAGAGTATTTCAAATGTAGGTCACATGACACCATCTTCCCAAGTACTAAATGACCTTCAGCCTAACAATGCTGAGCGTGTAACATTAGATTCTCTGGTGGTTCAATATTTGAAACATCAGCATCGCCAATGTCCAGCTCCTATTACCACTCTCCCTCCACTGTCTCTTCTGCACCCGCATGTCTGTCCTGAACCAAAGCGAAGCCTTGATGCCCCTTCTAATGTGACAGCTCGGCTTGGTACACGGGAATATAAATATATGTATGGGGGAGTGCATGGGAATCGCAGGGATCGTCAATTTGTTTTCAGTCGGTTTAGGCCGTGGCGCACTTGTCGGGATGATGCTGGTGCTTTGTTAACATGCATTACATTTGTTGGGGACTCTTCTCATATTGCTGTTGGAAGCCATAATGGGGAGCTCAAATTTTTTGACTCCAACAACAGCAATGTGGTGGAGAGCTACACAGGTCACCAGTCTCCTTTGACTCTTGTTCAGTCTTTTGTTTCTGGTGAGACCCAGCTGTTACTTTCATCAAGCTCCCAAGATGTTAGGCTGTGGGATGCAACATCAATTTTAGGCGGTCCTTCTCATTCATTTGAAGGATGCAAGGCTGCCAGGTTTAGCAATTCTGGGAATGTTTTTGCAGCCTTGTCATCAGAATCTGCACGGCGGGACATCCTCTTGTATGATGTCCAAACAGCTCAGTTAGAGTCAAAGTTATCAGATACATTTGCAGCTTCTACAGGGCGAGGTCATGTTTATTCGTTAATTCATTTTAACCCTTCTGACTCTATGCTTCTTTGGAATGGTGTTTTATGGGACCGGCGGGTTTCTGGGCCTGTTCATCGCTTTGATCAGTTTACAGACTATGGTGGTGGAGGCTTTCATCCTGCTGGCAACGAGGTTATTATAAACTCAGAAGTCTGGGATCTGCGCAAATTCAGACTGCTACGCAGTGTACCTTCATTAGATCAAACATCAATAACATTCAATGCACGTGGTGATGTAATGTATGCAATCTTAAGGAGAAATCTTGAGGATGTAATGTCAGCAGTCCACACTCGTCGTGTGAAGCACCCTCTTTTTGCAGCCTTCCGCACAGTGGATGCAATAAATTATTCTGACATTGCAACCATACCTGTGGATCGCTGTGTTCTTGATTTTGCAGCTGAGCCAACAGATTCATTTGACAAATGTCATCCTTGGTCACTCGACAAATTAATAGCCTCAAATTACCGCTTTCGCCTCCTCTTTGCTGTTTTGGTTCAATTGCAGTATGAATCATATCCACTAGGTCGCGTAGCATAA 5475 0.4442 MEDQANQAPPPRDEEEDSKKEEEELIAKVNKLMEKITSAPDNPNDTVLHALASILEAQESRYMEESGHSSSTTARAAHVIGRLGSLIRENDEFFELISSKFLLETRYSTSIQAAAGRLLLCCSLTWIYPHDFEESVMENIKNWVMDDNIGLPAEGQNLKHNLVKRGASNSEMLKTYSTGLLAVCLDGGGQQIVEDVLTSGLSAKLMRYLRLRVLGETSGNQKDVTHLTESRHASANTSGRSRDDGRGRFRQLLESNALDDTRVIDERSLDDVTLERGPDRSISGQTCQDGSWIDGEPPDGLGEGADVHEVDSDGEERWRCRDIRDGRIKYGEHDDNIRDESSRRRANRGWGRSRGKSRVNEGAVESDPILSSPGSGSRLGQGRSVRDRSVLRNADIRRVTDAKKTLGRTPSEASAFEREDNDDCFQECRVGSKDITDLVRKAVQSAEAEARSANAPEEAVKAAGDAAADLVKTAASEVCSEAAFLAASRAASTVIDAASAVEVSRSSICDSTVTENVSGKETETNEDVEEYFIPDTQSLAQLREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLALLQQNSKHWEASKVALLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPTMPQTFFGLSSCLFTIGSLQGIMERVCALPSQVVYHVVELALQLLDCNQDQARKNAALFFAAAFVFRAVLEAFDSLDGLQKLLGLLNDAASVRSGVNSGALSLSNSGSLRNDRSSAEVLTSSEKQIAYHTCGALRQYFRAHLLVLVDSIRPNKSNRSAARNISSVRAVYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWLAVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNVTLSNNRVGIAVILDAANIASNHVDPEIIQPALNVLVNLVCPPPSISNKPAMAAQGQQLPSSQTSYGAPSEARDRNAERNVSDRTAHSTSQIDPRERNGESNAGLSTQPVNSTPQTPVASAASALVGDRRISLGAGAGCAGLAAQLEQGYRQARETVRSNNGIKVLLHLLQPRIYSPPAALDCLRALSCRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTLGTEQGRWQAELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLAHTASMLIKEAQLTPLPSLVLPSSLPQQPTTQEASSTPIQWPSGRSPSGFLLNKLKFNAKDADAVLKCDSVSAKKKSLTFSSSFHSRFQLLDSQSSVRKLSNTGKESSEISVVETTFGSSVKHNIDTGSQFKTPISLPAKRKLSDLKDISMFSSSGKRLNVGDQGLRSPICSSAIRKSSLQTDSVGLFTPTCNLKPGRCTGDLVDEIQSISNVGHMTPSSQVLNDLQPNNAERVTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVTARLGTREYKYMYGGVHGNRRDRQFVFSRFRPWRTCRDDAGALLTCITFVGDSSHIAVGSHNGELKFFDSNNSNVVESYTGHQSPLTLVQSFVSGETQLLLSSSSQDVRLWDATSILGGPSHSFEGCKAARFSNSGNVFAALSSESARRDILLYDVQTAQLESKLSDTFAASTGRGHVYSLIHFNPSDSMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVDRCVLDFAAEPTDSFDKCHPWSLDKLIASNYRFRLLFAVLVQLQYESYPLGRVA 1824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2402 1824 PANTHER BNAA03G51310D PROTEIN 320 955 - -
Aed7g2402 1824 PANTHER BNAA03G51310D PROTEIN 1291 1786 - -
Aed7g2402 1824 MobiDBLite consensus disorder prediction 1204 1226 - -
Aed7g2402 1824 MobiDBLite consensus disorder prediction 976 1001 - -
Aed7g2402 1824 PANTHER VPRBP PROTEIN-RELATED 14 259 IPR033270 GO:0016567
Aed7g2402 1824 Gene3D - 1493 1787 IPR015943 GO:0005515
Aed7g2402 1824 SMART Lish 1165 1197 IPR006594 GO:0005515
Aed7g2402 1824 Coils Coil 12 39 - -
Aed7g2402 1824 SMART WD40_4 1536 1576 IPR001680 GO:0005515
Aed7g2402 1824 SMART WD40_4 1581 1619 IPR001680 GO:0005515
Aed7g2402 1824 SMART WD40_4 1493 1533 IPR001680 GO:0005515
Aed7g2402 1824 MobiDBLite consensus disorder prediction 220 235 - -
Aed7g2402 1824 PANTHER BNAA03G51310D PROTEIN 14 259 - -
Aed7g2402 1824 PANTHER VPRBP PROTEIN-RELATED 983 1271 IPR033270 GO:0016567
Aed7g2402 1824 MobiDBLite consensus disorder prediction 1 23 - -
Aed7g2402 1824 SUPERFAMILY ARM repeat 559 1105 IPR016024 -
Aed7g2402 1824 MobiDBLite consensus disorder prediction 270 315 - -
Aed7g2402 1824 ProSiteProfiles LIS1 homology (LisH) motif profile. 1165 1197 IPR006594 GO:0005515
Aed7g2402 1824 MobiDBLite consensus disorder prediction 930 1002 - -
Aed7g2402 1824 MobiDBLite consensus disorder prediction 338 387 - -
Aed7g2402 1824 MobiDBLite consensus disorder prediction 220 246 - -
Aed7g2402 1824 MobiDBLite consensus disorder prediction 301 315 - -
Aed7g2402 1824 PANTHER VPRBP PROTEIN-RELATED 320 955 IPR033270 GO:0016567
Aed7g2402 1824 PANTHER VPRBP PROTEIN-RELATED 1291 1786 IPR033270 GO:0016567
Aed7g2402 1824 SUPERFAMILY WD40 repeat-like 1495 1725 IPR036322 GO:0005515
Aed7g2402 1824 MobiDBLite consensus disorder prediction 931 951 - -
Aed7g2402 1824 PANTHER BNAA03G51310D PROTEIN 983 1271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2402 Aed-Chr7 25964311 25973355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2402 1520 1726 U-box Gene Family AT2G33340 25.000 2.03e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2402 K11789 - gmx:100796030 3048.07