Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2393 GAATCCCCCTTTCTTAGTTTTGTAAAGACTTTATCTCCAATACACACCAAGGTTTGTCATACGGCACAAGGTTTTCAAGGGCTAAGTTCTCCACCACTTGTATTCAAGTCTGCAAGTATTAGTCACCGTGAAACACAGTTCATGGAAGGGCCTCAAGGCACTCAGTCACTCGGTGTAAATGAAGGCAACAGGCTTGGTGAAGCTCGTGAAGATTCCAGGAAGTGTTATTCTCAGCAGCCTCTGCCAGAGAGATTTATAATTGACACTCAGAAGGTTTTTGACTCCAATAATGATGCAAATACTCAATACTACAGTTCTCCGTCGTGTATTGATAAGTATTTGGTGGATCCTGGGGATATTGATCAAATGTATTCAGCCGACCAGGATGTGGAACAACAATCTACAGATGCGGCTGAAACATCACTAAGTGACCAAACTCATTCAGAGAAAAATATATTAAATTTTGACAGGAAAGATGGGCCTGGTGATAAAGCAGAAGAATCTTTGTCTTTGTCTGAGGATTCTAACAAGGTTCATCAAGAAGAGGCAGCATATGGTGAAGAACCTGAAAATATGGAAGTGGAGAAAAATGATGTTGAATGGGCTTCTCAAGAACCTGCAAATTTAGAGGCCATTTTTCATGAACGATATAGTCATGATCCACTTCCTCAGTCAGTATTTAAAGTTATGTCACATCAACTTGATCAGCTTCAGCTTGTGGATAATTATCAATGGGATCATAAAAATGGTACACCTCAGTGGATGCCTGGTCCTCTGCAGGATGTTAAAGGATGTGAATATTACATTGACATGGTGCCAACCTCACATGTAACTGCAGAGAATATCTTGCAAGATGGTTCTGAGGCTACTCTAAAGTACCATGGCATTCGTAGACACCGTCTAAAATTTGGGGAAGCTGCCTCCAATGCTCTTGGAAGTAATATCAAACTGAATGCAACTTTAAACAAAATTAAAATGGTCAATCCGTCCGAACTTGTCACTTCCTTGTGTCCTCAGCGAGGTAGTGGAAACTTACCTTTGACAGGTCCCAAGCCACCAGGTATTGGGTTGCATTTAAATAGTATCATAAATGCTATTCCAACTGGTCAGGCTGCAATTACGGGTGTGAGATTATCAGATGGTTCACAGGGGATGAATTCCATATCTTCAATAAGGTTACAAAGAATGCAGCATGTGAAGCGATCCATACTTTCATCTAATGTTGATGGGCAATCATTACTTGATACAAGAAATGAGAGCCATGAAATTGATGATACAATAGCTACAGATGCTGGAAATTCTGAGGACTTCAATCAACCTCCTAGCCCCTGCAAGAAAAAGAAGAAAACATCAGTCGCTGCTGATGACAATGGCTGTAAACGGTGCAACTGTAAGAAGAGTAAATGTTTAAAACTTTACTGTGAGTGTTTTACTGCTGGAATCTACTGTACCGACCCTTGTGCTTGCCTAGGCTGCTTAAACAGACCAGAATATGCAGAGACAGTTGTCGAGATTAAACAACAAATTGAATCCCGTAATCCAATTGCATTTACTCCCAAGATTGTACAGACTACCACTGATATTTTGTCAAATACGGTGGAGGATACAAATCTGACTAAACCATCATCGGCAAGGCATAAAAGAGGTTGCAATTGCAAAAGGTCAATGTGTCTGAAAAAGTATTGTGAATGTTATCAGGCTAATGTTGGGTGCTCAAGTGGATGTCGATGTGAGGGATGTAAGAACGCCTATGGCAAGAAAGAAGATTATGTTGCATTTGAACATACTTCGAGAAAAGAAAGGATTAGCAGTATTGTTGAAGAAGGATCACACCACACACTTAACAATAAACTGGAAATGGTGGCTTGCAAGACTGTTTATGATCTACAGCGCCTCTCACCTATAACGCCATCATTGCAATGCTCTGACCAAAGCAAGGAGGCTGCAAAATCCAGAGTTATTTCTGGAAACTATCTACCTTCCCCCGAATCTGATGTCAATAAGTTTGCATCTTGTGCTAACTGCACTGAATCTTGTGAAAATTTGCACAGCAATTATGAACTTCTGGAAACAAATGAGATGTTGGGAAGTGTCCCCGGTGATTCACAAATTGAATGCAACAATGCTATCCCACTTCAGCTTACTCCTCCTCTGCCTAATCCTGAGCAATCTGGCACTTCATCATTCCCATCTGTAGCAAGTGAGTGGACAAGTATTCCTCAATCCCGACTCTCCCGCGGATCTCTTCGTTGGCGTAGTTCCCCACTTACCCCAAGCACTAGAGTAGTAGGCGAAGCACAATATTTACAGCGTTCCGAATTAGATAGCAGGCTCTATGACATTCTAGAATATGAAACCCCTGATATACTGAAAGAAGCAGCTTTGACTCCTATGACGTCCGTCAAAGTAAATTCCCCAACCCAAAAACGTGTTTCTCCTCCCCAGAGTCGTCATCTTGGGATTGTTGGATCAAGCTCCTCCGGAGAATTGAGAAGTGGCAGGAAAGCCGTACCTTCTTTTCCTTCATTGTCTCCTTGCGTTAAATCCAAAAGCAATGACGATGAGGATTCTCCCAACAGTCCAGAGCGAGTGACAATTGACTAA 2604 0.4171 ESPFLSFVKTLSPIHTKVCHTAQGFQGLSSPPLVFKSASISHRETQFMEGPQGTQSLGVNEGNRLGEAREDSRKCYSQQPLPERFIIDTQKVFDSNNDANTQYYSSPSCIDKYLVDPGDIDQMYSADQDVEQQSTDAAETSLSDQTHSEKNILNFDRKDGPGDKAEESLSLSEDSNKVHQEEAAYGEEPENMEVEKNDVEWASQEPANLEAIFHERYSHDPLPQSVFKVMSHQLDQLQLVDNYQWDHKNGTPQWMPGPLQDVKGCEYYIDMVPTSHVTAENILQDGSEATLKYHGIRRHRLKFGEAASNALGSNIKLNATLNKIKMVNPSELVTSLCPQRGSGNLPLTGPKPPGIGLHLNSIINAIPTGQAAITGVRLSDGSQGMNSISSIRLQRMQHVKRSILSSNVDGQSLLDTRNESHEIDDTIATDAGNSEDFNQPPSPCKKKKKTSVAADDNGCKRCNCKKSKCLKLYCECFTAGIYCTDPCACLGCLNRPEYAETVVEIKQQIESRNPIAFTPKIVQTTTDILSNTVEDTNLTKPSSARHKRGCNCKRSMCLKKYCECYQANVGCSSGCRCEGCKNAYGKKEDYVAFEHTSRKERISSIVEEGSHHTLNNKLEMVACKTVYDLQRLSPITPSLQCSDQSKEAAKSRVISGNYLPSPESDVNKFASCANCTESCENLHSNYELLETNEMLGSVPGDSQIECNNAIPLQLTPPLPNPEQSGTSSFPSVASEWTSIPQSRLSRGSLRWRSSPLTPSTRVVGEAQYLQRSELDSRLYDILEYETPDILKEAALTPMTSVKVNSPTQKRVSPPQSRHLGIVGSSSSGELRSGRKAVPSFPSLSPCVKSKSNDDEDSPNSPERVTID 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2393 867 MobiDBLite consensus disorder prediction 801 867 - -
Aed7g2393 867 ProSiteProfiles CRC domain profile. 458 585 IPR005172 -
Aed7g2393 867 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 1 855 - -
Aed7g2393 867 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 460 495 IPR005172 -
Aed7g2393 867 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 548 583 IPR005172 -
Aed7g2393 867 MobiDBLite consensus disorder prediction 128 192 - -
Aed7g2393 867 MobiDBLite consensus disorder prediction 429 448 - -
Aed7g2393 867 MobiDBLite consensus disorder prediction 128 149 - -
Aed7g2393 867 MobiDBLite consensus disorder prediction 150 192 - -
Aed7g2393 867 SMART CXC_2 545 586 IPR033467 -
Aed7g2393 867 SMART CXC_2 457 498 IPR033467 -
Aed7g2393 867 MobiDBLite consensus disorder prediction 801 832 - -
Aed7g2393 867 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 855 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2393 Aed-Chr7 25888204 25892574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2393 353 600 CPP Transcription Factor Family AT3G22760 46.185 8.23e-60 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aed7g2393 TCR 5.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2393 K21776 - gmx:547664 1254.2