Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2388 ATGGGCGGTATCAGCCTTGAGGAAATCAAAAATGAAAACGTCGATCTGGAAAAAATTCCAGTAGAGGAAGTGTTTGAGCAGCTGAAATGTTCAAAAGCAGGTCTAACCTCAGACGAAGGAGCCAGCCGGCTTCAAGTTTTTGGACCAAACAAATTGGAAGAGAAAAAGGAGAGCAAACTGTTGAAATTTTTGGGTTTCATGTGGAACCCCTTATCATGGGTCATGGAAGCTGCTGCTATAATGGCTATTGCTTTGGCCAACGGTGGAGGAAGGCCTCCGGATTGGCAAGATTTCGTTGGTATCATTGCTCTATTGTTCATTAACTCCACAATCAGTTTCATTGAAGAAAACAATGCTGGTAATGCTGCTGCTGCACTCATGGCTGGTTTAGCTCCCAAGACCAAGGTGGCAACTTTTCTAGCAGTATATGCTAACTGGGGCTTTGCAAGAATTCAGGGAATGGGATGGGGTTGGGCTGGTGTAATCTGGCTCTACAGTTTAGTGACATATATCCCTCTTGATATACTCAAATTCGCAATCCGCTATACTGCCTTCACTACAAAGAAAGACTATGGCAAAGAAGAGAGAGAAGCACAGTGGGCAACTGCACAGAGGACTCTTCATGGTCTTCAGCCACCTGAAACAACCAACCTTTTCAATGACAAAAACAGTTACAGGGAGCTTTCAGAGATTGCTGAGCAAGCAAAGAGACGTGCCGAAGTTGCAAGGCTCAGGGAGCTTCACACTCTGAAAGGACATGTTGAGTCAGTGGTGAAGCTGAAGGGACTTGACATTGATACAATCCAACAGCATTATACAGTATAA 825 0.4448 MGGISLEEIKNENVDLEKIPVEEVFEQLKCSKAGLTSDEGASRLQVFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLFINSTISFIEENNAGNAAAALMAGLAPKTKVATFLAVYANWGFARIQGMGWGWAGVIWLYSLVTYIPLDILKFAIRYTAFTTKKDYGKEEREAQWATAQRTLHGLQPPETTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2388 274 PANTHER PLASMA MEMBRANE ATPASE 136 255 - -
Aed7g2388 274 PANTHER PLASMA MEMBRANE ATPASE 1 136 - -
Aed7g2388 274 PANTHER CALCIUM-TRANSPORTING ATPASE 1 136 - -
Aed7g2388 274 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Aed7g2388 274 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 132 IPR023298 -
Aed7g2388 274 Coils Coil 225 245 - -
Aed7g2388 274 Gene3D - 136 183 - -
Aed7g2388 274 Gene3D - 66 135 - -
Aed7g2388 274 PANTHER CALCIUM-TRANSPORTING ATPASE 136 255 - -
Aed7g2388 274 Gene3D - 223 274 - -
Aed7g2388 274 Pfam Cation transporter/ATPase, N-terminus 18 81 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2388 Aed-Chr7 25846136 25852684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2388 103 274 Primary Pumps ATPases AT2G24520 67.742 5.03e-79 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2388 K01535 - gmx:547525 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1065 6 15075925 15086236 Aed7g2388 7 25846136 25852684 PCT