Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2385 ATGGATGAATATTCTGATAAAAGAGCCATTGATGGGGCGGTAGTCCCTAGAAAGGGGATGGGTCATGCGTTTAGAGATAGAGATACAGCTAATGCTAGAGATCGAAATGGTCAGGTGTGCAGCCGCATTACTTGCAGTAGCAGAGTCAACTCTCCTAAAGGTGCTCAAATTGGTTCATCTGAGAAAGGTAAATCTTTGAAACCTTCAATCCAATCTTCAGCTGGCAAGGAAGCAATTGGAAGCTCCTCTAGAACCTTTTCCAAGACTAGTAGCCCAGGAAAACCACTTATAAAGCCTCGGAAATCATCATCATCTCAGTTAGAGACAGATACATCTGAAACTAGTAGTTTACAGGATGAAAAAGATGTTTCAAAACTTGCCCCTCCCCCTGAAAAAAGTCGGACAGGGCTTCAAGCTGAATTGAATAAAACAGTGTCTGGTAATGTCATGATGGAAGTAGGAAGCTCTAGTGTAGTATCCAATACAAGATCTCGGAGGAATTTTCATCCAAAGGATGGATTACGCACTCAAGAAATTAAAAGCACTGGGCCAGTGACACGTGCTGGTGCCAGTAGGTATGGATTGAGGAACCTCAGATGCAACTCTATTTCTGATATCGTCCCTGCTAGTTGTTCACCTTCAGATTCAACCCTTAGCAGAAGGAAGGATGTGATAAAAAAGAGAAATTGTGAAGGGGAAGGTAGTTCCACTGCTAGAGGGAAGAAAATGAGCGGGTCTTCATTAGAAGCACGGAATTCTGGTTCCAGAAATGGCATATCTATCTCTGAATCAAGAATATCTAGGAATACTCCTCAAAGGGACAGGTCAGACAGCAATATGGCACCAATTAGAAATCGAAAATCGATTAGTGGTCATACCAGGGGAAGGCTTTCTACCCAAGGAAATGCTAATCCTGGGTCACCCAATGAGTCGCATGTCCTGATGCCTTCTTTGCCTCGTTCTGGTGGTCTTAATATTCCTGGTGTATCACATCATACTTCTGTAGATAGTCCCCTAAATTGTCCTAGCTCTCATAGTAGACCAGGTACTGGCAGTGAGGACTTATATGGTGTTATGCCTGTATCTTCTTCAGAATATGGCCTCACTCATTCTCTTATGAATCTGGATAGCTTTCGACGACGTTACAACATGGATAGTATTGCAGAGGAGGAATACGTGGTTGCAGATGAATTGGGGATTTTGCAATGCGAGCACATGTATCATGGGGCTTGCATACAGCAGTGGCTACGGCTAAAGAACTGGTGCCCTATTTGCAAAGCATCAGTGACACCTTCAAATTCATCACCATCTCAATGA 1317 0.4336 MDEYSDKRAIDGAVVPRKGMGHAFRDRDTANARDRNGQVCSRITCSSRVNSPKGAQIGSSEKGKSLKPSIQSSAGKEAIGSSSRTFSKTSSPGKPLIKPRKSSSSQLETDTSETSSLQDEKDVSKLAPPPEKSRTGLQAELNKTVSGNVMMEVGSSSVVSNTRSRRNFHPKDGLRTQEIKSTGPVTRAGASRYGLRNLRCNSISDIVPASCSPSDSTLSRRKDVIKKRNCEGEGSSTARGKKMSGSSLEARNSGSRNGISISESRISRNTPQRDRSDSNMAPIRNRKSISGHTRGRLSTQGNANPGSPNESHVLMPSLPRSGGLNIPGVSHHTSVDSPLNCPSSHSRPGTGSEDLYGVMPVSSSEYGLTHSLMNLDSFRRRYNMDSIAEEEYVVADELGILQCEHMYHGACIQQWLRLKNWCPICKASVTPSNSSPSQ 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2385 438 MobiDBLite consensus disorder prediction 34 113 - -
Aed7g2385 438 Pfam RING-H2 zinc finger domain 402 426 IPR024766 GO:0008270
Aed7g2385 438 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 381 437 IPR013083 -
Aed7g2385 438 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED 390 430 - -
Aed7g2385 438 MobiDBLite consensus disorder prediction 219 235 - -
Aed7g2385 438 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED 1 389 - -
Aed7g2385 438 MobiDBLite consensus disorder prediction 1 137 - -
Aed7g2385 438 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 390 430 IPR045191 GO:0061630
Aed7g2385 438 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 389 IPR045191 GO:0061630
Aed7g2385 438 MobiDBLite consensus disorder prediction 114 128 - -
Aed7g2385 438 MobiDBLite consensus disorder prediction 239 311 - -
Aed7g2385 438 SUPERFAMILY RING/U-box 391 432 - -
Aed7g2385 438 MobiDBLite consensus disorder prediction 205 357 - -
Aed7g2385 438 MobiDBLite consensus disorder prediction 327 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2385 Aed-Chr7 25825053 25829385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2385 387 426 C3H Transcription Factor Family AT2G15530 57.500 2.74e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2385 - - gmx:100787213 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1055 6 15031420 15037398 Aed7g2385 7 25825053 25829385 PCT