Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2380 ATGGTCCTTTTCAAGTATGGTAATTGCTCTTCTCCCCAATATATCTTCCCCTCCCCTTCCATTCCATCTTCTCTTGACAACACAACACAACACAACAAATACAAAGCCACACATTCTGAAAATGATAGTGGAGTTACGTTGATGGAGGAACAGAAGGCCATTGAAGAAGCAGCATCGGAGGGCCTGAAAGGCATGGAACACCTCGTCCGTCTCCTCTCCCACCAACCCTCTCACCTCCGCACTGACGTCACCGTTTCCAGCTTCAAAAAACTCATCTCCCTTCTCAACCGCACCGGCCACGCCCGTTTCCGCCGCGCACCTCTTCATGTCCCCGCTCAGTCCCAGAGTCTAACCCTAGATTTCACAAAACCTAACATCTTCGCCTCCAAGCAGGAAACCTTTAGCGTCTCCTCCAACTCCACCTCCTTCATGTCCTCCGCCCTCACCGCCGACGCCAGCGTCTCCATCAAGAACAACCGCCACGACCACGTCTCCGGGAAACTCTCCTGCTCCACCAAGTGCCACTGCGTCAAGAGAAGGAAGAATCGTATGAAGAAGACGGTAAGAGTGCCAGCGATTAGTTCGAAGAACGCCGATATTCCGCCGGACGAATACTCGTGGAGGAAGTACGGCCAGAAGCCTATCAAGGGATCGCCGTACCCGAGGGGTTATTATAAGTGCAGTACCGTGAGAGGGTGTCCGGCGAGGAAACACGTGGAGCGTGCTTCGGATGATCCAACGATGTTGATTGTGACGTACGAGGCGGAGCACCGCCACTCGATGCAGGATAACATTTCCGGTGGCGTGGGTTTGGTAGTATTTGAGTCAACGTAA 834 0.53 MVLFKYGNCSSPQYIFPSPSIPSSLDNTTQHNKYKATHSENDSGVTLMEEQKAIEEAASEGLKGMEHLVRLLSHQPSHLRTDVTVSSFKKLISLLNRTGHARFRRAPLHVPAQSQSLTLDFTKPNIFASKQETFSVSSNSTSFMSSALTADASVSIKNNRHDHVSGKLSCSTKCHCVKRRKNRMKKTVRVPAISSKNADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERASDDPTMLIVTYEAEHRHSMQDNISGGVGLVVFEST 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2380 277 Gene3D WRKY domain 187 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed7g2380 277 PANTHER WRKY PROTEIN 162 271 - -
Aed7g2380 277 PANTHER WRKY PROTEIN 46 158 - -
Aed7g2380 277 ProSiteProfiles WRKY domain profile. 196 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed7g2380 277 SUPERFAMILY WRKY DNA-binding domain 197 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed7g2380 277 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 46 158 IPR044810 GO:0003700
Aed7g2380 277 Pfam WRKY DNA -binding domain 203 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed7g2380 277 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 162 271 IPR044810 GO:0003700
Aed7g2380 277 SMART WRKY_cls 201 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed7g2380 277 Pfam Plant zinc cluster domain 160 199 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2380 Aed-Chr7 25787601 25789578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2380 48 276 WRKY Transcription Factor Family AT2G24570 50.968 7.50e-87 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed7g2380 WRKY 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2380 - - gmx:100127394 340.502