Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2378 ATGGAGCTAAAAAATGAGAATCTAGTCAGTTCCTATGGCCAGAGTTTGACTACAAGCACATTCGTTTGGGAAACTGCATTTGCAATACTCATAGCTATTCTGGGTCTGGTTCTGTTTGCCCACTTAATTGGTAACATGCAGACCTATTTGCAATCCATTACTGTGAGGCTTGAAGAGTGGAGGCTGAAGCGACGCGACACCGAAGAGTGGATGAGCCATCGGCAGCTCCCACAAAATCTCAGAGAGCGTGTCCGAAGATTTGTTCAGTACAAGTGGCTTGCAACTCGTGGCGTTGATGAAGAAACAATCCTACGTGGCCTCCCTACTGATCTACGTAGAGATATCCAACGCCACCTTTGCTTGGACCTTGTTCGACGTGTTCCCTTTTTCTCACAAATGGATGATCAGCTACTTGATGCAATATGTGAGAGATTGGTATCATCCTTGAGTACTCAAGGCACATACATAGTCAGAGAAGGAGACCCGGTTACAGAGATGCTTTTTATCATCAGAGGGAGACTTGAAAGCTCAACCACAAATGGAGGCAGAACTGGTTTCTTCAACTCTAATACCTTGAGGCCTGGTGATTTCTGTGGAGAAGAGCTACTTGCTTGGGCATTGCTTCCAAAATCCACTCTCAACTTGCCTTCTTCTACAAGAACAGTTAAGGCCCTTGTGGAAGTGGAAGCCTTTGCACTAAGAGCAGAAGATCTTAAATTTGTGGCCAACCAGTTCAGGCGTCTCCACAGCAAGAAGTTGCAGCACACTTTCCGTTTCTACTCTTACCATTGGAGGACATGGGCAGCATGCTTCATTCAGGCTGCGTGGCGCCGGTTCAAGAAGAGAATGTTGGCAAAGAGCCTTAGCTTGAGGGAATGCCAGTCTTTCAATCACGATGAACAAGTCGGGGATGAAATGGAACACAGGGAAGAAGAGCACAGTACTGTGACTTCAAACACTGCACAAGTGAAACAGAACCTAGGTGTAACTATACTGGCTTCAAGATTTGCTGCTAACACAAGGAGAGGGGTTCAGAAGATGAAGGATGTAGAGTTGCCCAAGTTTCAAAAGCCGGAAGAGCCAGACTTTTCCGTAGAGCCTGATGATGATTAG 1113 0.4618 MELKNENLVSSYGQSLTTSTFVWETAFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMSHRQLPQNLRERVRRFVQYKWLATRGVDEETILRGLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSNTLRPGDFCGEELLAWALLPKSTLNLPSSTRTVKALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQAAWRRFKKRMLAKSLSLRECQSFNHDEQVGDEMEHREEEHSTVTSNTAQVKQNLGVTILASRFAANTRRGVQKMKDVELPKFQKPEEPDFSVEPDDD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2378 370 ProSiteProfiles cAMP/cGMP binding motif profile. 129 212 IPR000595 -
Aed7g2378 370 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 9 367 - -
Aed7g2378 370 SMART cnmp_10 129 260 IPR000595 -
Aed7g2378 370 MobiDBLite consensus disorder prediction 347 362 - -
Aed7g2378 370 CDD CAP_ED 129 260 IPR000595 -
Aed7g2378 370 Gene3D Helix hairpin bin 57 120 - -
Aed7g2378 370 Pfam Cyclic nucleotide-binding domain 152 240 IPR000595 -
Aed7g2378 370 Gene3D Jelly Rolls 127 247 IPR014710 -
Aed7g2378 370 SUPERFAMILY cAMP-binding domain-like 59 251 IPR018490 -
Aed7g2378 370 MobiDBLite consensus disorder prediction 301 315 - -
Aed7g2378 370 MobiDBLite consensus disorder prediction 301 320 - -
Aed7g2378 370 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 367 - -
Aed7g2378 370 MobiDBLite consensus disorder prediction 347 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2378 Aed-Chr7 25775546 25779294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2378 9 366 Ion Channels AT2G24610 78.356 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2378 K05391 - gmx:100803334 708.753