Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2373 ATGGCACATAGAAGAGAATATTGCAGTCTTCTTCTCATGTTCTTCACTTGTTTTTTGTCATCATTGGCTGACAATGCTCAAGTTCTGATGAACTTCAAAAGTAACCTGTCCAATGCTGATGCTTTAAAGAACTGGGGGGATCCATCAATTGTTCTGTGCAGCTGGAGTGGTATATTATGCTTCGATCAAAATTTTCATGGCTTGAGATTAGAGAATATGGGACTAAGTGGCACTATCAACGTAGACGCGTTGCTTGAGTTGTCCAATTTGAACAGTTTTAGTGTCATGAACAACAACTTCGAGGGTCCAATGCCTGAATTCAATAAGCTTGTGAGTTTAAGGGCGTTGTTTCTGAGCAATAACAAATTCTCTGGTGAAATTCCGGATGATGCTTTTGAAGGCATGAGACGTCTCAGGAGAGTGTTCTTGGCTCAAAATGGGTTCACGGGCAATGAAGGTCTATGTGGGAAACCTCTGGCCCCCTGCGTCGCAAACACAGATTTAAGTTTTGGCCAAGAAAAAGAAGACAACAAAAACCACATCCTTTTAATCGTAATTATTGTAGTGGTGGGTGTGATTGTGTTGGCTTCAATACTGGCACTTGTGTTCATCCGTTACCGCCGAAAGCAGGCCGTGTTGGTCGGTGATGCACAACAACCGCGGCACGTTACTAGTCCAGTACATTCCAGTGAGTCGAAATCCATTGTTGCAGTGGCGGGCGGTGAGTCCAATAAAAGCGAAGACGGTAGTCTGAGCTTCGTTGGGAACGGAAGGGAGGCGTTTGACTTGCAAGACTTGCTGAGGGCCTCGGCTGAGGTTCTGGGGAGTGGCAGTTTTGGATCCACGTACAAGGCCATGCTTATGAATGGGCCTGTTGTGGTGGTCAAGAGATTCAAGCACATGAACAACGTTGGGAAAAAAGAGTTCTTTGATCACATGAAAAGGCTTGGAAGGTTGTCACACCCCAATCTTCTCCCTCTTGTGGCGTTTTACTATGGAAAAGAAGAGAAGCTTTTGGTCCATGACTTTGCCCAAAATGGCAGCTTGGCCAGTCATCTTCATGGTAGTGGTAGTGGTAGTGAGTTGAATTGGGCAACTCGATTGAAGATTATAAAAGGAGTGGCTAAGGGGTTAGCATATCTCTACACGGAGTTTCCCGACCAAGACATACCGCACGGCCACCTTAAATCGTCGAACGTGGTGTTGGACGGTACATTCGAGGCTCGTTTGGGAGAGTACGGACTAGCGGCGGTGGTGGAGAAGAGCCACGCTCAGCAGTTCATGGTGGCGTACAAGTCTCCAGAGGTGAGACAGATGGAGAGGCCGAGCGAGAAGAGTGACGTGTGGTGTTTGGGGATTCTGATATTGGAGATTCTGACGGGGAAGTTCCCAGCGAGTTATCTGAGATATGGGAAGGGTGCGAGTGAGGATTTGGCCGCGTGGGTGAACTCGATTGTGAGGGAAGGGTGGAGTGGGGATGTGCTTGATAAGGAGATTCCTGGGAGAGGGAGTGGGGAGGGTGAGATGCTGAAGCTGTTGAGGATTGGGATGGGGTGCTGTGAGTGGAGCTTCGAGACTAGGTGGGATTGGAGAGAGGCTGTATCCAAGATTCTGGACTTGAAGGAAGAGACCACTGATCATCTTCATGATGGAACTGGAAGTGATCATATGTACTCATTATCTATGAGTCAGGATGACTTCTCTCTCACTCACTAG 1716 0.4767 MAHRREYCSLLLMFFTCFLSSLADNAQVLMNFKSNLSNADALKNWGDPSIVLCSWSGILCFDQNFHGLRLENMGLSGTINVDALLELSNLNSFSVMNNNFEGPMPEFNKLVSLRALFLSNNKFSGEIPDDAFEGMRRLRRVFLAQNGFTGNEGLCGKPLAPCVANTDLSFGQEKEDNKNHILLIVIIVVVGVIVLASILALVFIRYRRKQAVLVGDAQQPRHVTSPVHSSESKSIVAVAGGESNKSEDGSLSFVGNGREAFDLQDLLRASAEVLGSGSFGSTYKAMLMNGPVVVVKRFKHMNNVGKKEFFDHMKRLGRLSHPNLLPLVAFYYGKEEKLLVHDFAQNGSLASHLHGSGSGSELNWATRLKIIKGVAKGLAYLYTEFPDQDIPHGHLKSSNVVLDGTFEARLGEYGLAAVVEKSHAQQFMVAYKSPEVRQMERPSEKSDVWCLGILILEILTGKFPASYLRYGKGASEDLAAWVNSIVREGWSGDVLDKEIPGRGSGEGEMLKLLRIGMGCCEWSFETRWDWREAVSKILDLKEETTDHLHDGTGSDHMYSLSMSQDDFSLTH 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2373 571 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Aed7g2373 571 SUPERFAMILY L domain-like 27 150 - -
Aed7g2373 571 Gene3D Phosphorylase Kinase; domain 1 236 343 - -
Aed7g2373 571 SUPERFAMILY Protein kinase-like (PK-like) 272 537 IPR011009 -
Aed7g2373 571 Gene3D Ribonuclease Inhibitor 23 162 IPR032675 -
Aed7g2373 571 ProSiteProfiles Protein kinase domain profile. 268 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g2373 571 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 151 - -
Aed7g2373 571 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 148 548 - -
Aed7g2373 571 Gene3D Transferase(Phosphotransferase) domain 1 344 559 - -
Aed7g2373 571 ProSitePatterns Protein kinases ATP-binding region signature. 274 296 IPR017441 GO:0005524
Aed7g2373 571 PANTHER LRR RECEPTOR-LIKE KINASE 9 151 - -
Aed7g2373 571 PANTHER LRR RECEPTOR-LIKE KINASE 148 548 - -
Aed7g2373 571 Pfam Protein kinase domain 271 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2373 Aed-Chr7 25731746 25733959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2373 11 569 Receptor kinase-like Gene Family AT4G31250 40.473 3.47e-153 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed7g2373 Pkinase 2.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2373 - - gmx:100803999 704.516