Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2358 ATGGTAGCTGTCGAAAAAATTCAAATGGAAAGGGAACGAACACGGAAACGCCCTCGTCTCGCGTGGGACGTAGCCCCTCCTCCCTCAGTGCCCGAGCCCGAGGCGCAACGCTCTCTGCCTGTTCCCGCTGACGAAGGATTCGAAAAAAAGCATGTTTCGCCTCCAAAAAGGGACGATGATCGAGAGGGCCATTATGTCTTCAATCTCGGCGAAAATCTCACTCCTAGATATAAAATCCTCAGCAAGATGGGTGAAGGCACATTTGGTCGGGTTTTGGAATGTTGGGACCGCCAAACAAGAGAATATGTGGCTATCAAGGTAGTTAGAAGCATACGGAAATATCGAGATGCAGCTATGCTCGAGATTGATGTGCTTCAACAGCTAGCCAAGAATGATAGAGGAAATTCGCGATGCGTGCAGATCAGAAATTGGTTTGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCTCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGTCAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGCCTAATCCACACTGACCTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGAATATGTAAAGCTCCCTAGCTATAAGAGAGTTTCCTCAGATGAAACGCAATTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATATGATAATCAGAATCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAGATTATTCTAGGTCTAGGGTGGTCATATCCATGTGATTTGTGGAGTGTTGGATGTATTCTCATTGAACTTTGCTCGGGTGAAGCATTGTTTCAGACTCATGATAACTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTATTCCCGAGCACATGATTCACAGTAAGGCTGCAGAAAAATATTTCAAACGTGGATCACGACTAAGATGGCCTGAAGGAGCTGTTTCAAGGGAAAGCATTAATGCTGTGAAGAAGCTTGGTCATCTTAAGAATGGCTGCAAGCTGAGAGCACTGCCAGTGATCACTGATCATTCTCATTCATCGATGGGAGTAAGAGAACTAGAAAATCGTTTCGTCACCACCCTCAGAAACTGTCCGAAAATAGCGGAACTGAAGAAGCTTCACGCCCACATCGTGAAGCTGTCACTGTCACAGAGCAACTTCCTGGCCACCAAAATGTTGGATCTATGCGGCAACTTGGGTCACGTGAATTACGCCACCTTGCTGTTCCAGCAACTAGAAAACCCCAACATCTTCTCTTACAACGCAATAATCAGAACCTACACTCACAATCACAAACATTCTCTGGCAATCACTCTGTTCAACGAAATGCTGACACATGCAACCAAAACAGCATTGCCAGACAGATTCACGACTATTGTGTCTTGGACGACCATGATTAATGGGTATGCTAGAGCAGGGTGTTATGTTGATGCGTTGGAGATTTTTCGCGAGATGCAAGTGGTGGGTATTGAGCCTGATGAGATTAGTGTTATATCTGTTCTGCCGGCATGTGCGCAGCTTGGTGCTCTTGAGGTGGGGAAGTGGATTCACAAGTACTCGGAGAAGAGTGGGTTTTTGAAAAAGACTGGTGTGTGTAATGCACTGGTTGAAATGTATGCTAAGTGTGGTTGCATTGATGAAGCTTGGGATTTGTTTGATCGGATGGTTGAGAAGGATGTGATTTCTTGGAGTACCATGATCGGGGGACTAGCTAATCATGGAAAAGGGTATGCGGCAATTCAAGTTTTTGAAGATATGCAGAAAGCAAGAGTGGATCCTAATGGGGTAACATTTGTTGGTGTTTTGTCAGCTTGTGCTCATGTAGGGTTGTGGAATGAAGGGTTAAGATATTTTGATGTTATGAGGGTGGAGTGTCATTTAGAGCCAGAGATTGAGCACTATGGTTGCCTAGTTGATCTTCTAGGACGTTCGGGACGGGTTGAGCAGGCTCTTGACACAGTGTTGAGGATGCCGATGCAACCAGATTCCAGGATATGGAACTCTTTGTTGAGCTCTTGTAGGATTCATTGCAATCTTGAGATCGCTGTTGTTGCCATGGAACAACTTTTAGAGCTTGAACCCGAAGAGTCTGGAAACTATGTCTTGCTTGCTAACATATATGCAGAACTTGGCAAGTGGGAAGGTGTATCAAATGTTAGGAAACTTATTAGAAGCAGGAATTTAAAAAAAATCCCGGGGTGTAGCTTGATTGAGGTTAACAACTTGGTTCAAGAATTTGTTTCGGGTGACAATTCGAAGCCTTTTTCACAAGATGTTTTTTGTGTCCTAGAAGGGCTTAGTTTACAACACATTAAAACCAATGACTTAATGGAATTTGTCGACGAAGATGCAAACCAAATTTATAGTAAAATTTAG 2466 0.4359 MVAVEKIQMERERTRKRPRLAWDVAPPPSVPEPEAQRSLPVPADEGFEKKHVSPPKRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAIKVVRSIRKYRDAAMLEIDVLQQLAKNDRGNSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCSFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYVKLPSYKRVSSDETQFRCLPKSSAIKLIDFGSTAYDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILIELCSGEALFQTHDNLEHLAMMERVLGPIPEHMIHSKAAEKYFKRGSRLRWPEGAVSRESINAVKKLGHLKNGCKLRALPVITDHSHSSMGVRELENRFVTTLRNCPKIAELKKLHAHIVKLSLSQSNFLATKMLDLCGNLGHVNYATLLFQQLENPNIFSYNAIIRTYTHNHKHSLAITLFNEMLTHATKTALPDRFTTIVSWTTMINGYARAGCYVDALEIFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKKTGVCNALVEMYAKCGCIDEAWDLFDRMVEKDVISWSTMIGGLANHGKGYAAIQVFEDMQKARVDPNGVTFVGVLSACAHVGLWNEGLRYFDVMRVECHLEPEIEHYGCLVDLLGRSGRVEQALDTVLRMPMQPDSRIWNSLLSSCRIHCNLEIAVVAMEQLLELEPEESGNYVLLANIYAELGKWEGVSNVRKLIRSRNLKKIPGCSLIEVNNLVQEFVSGDNSKPFSQDVFCVLEGLSLQHIKTNDLMEFVDEDANQIYSKI 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2358 821 MobiDBLite consensus disorder prediction 1 62 - -
Aed7g2358 821 SUPERFAMILY TPR-like 446 745 IPR011990 GO:0005515
Aed7g2358 821 Gene3D Phosphorylase Kinase; domain 1 64 157 - -
Aed7g2358 821 Gene3D Transferase(Phosphotransferase) domain 1 131 349 - -
Aed7g2358 821 Gene3D Tetratricopeptide repeat domain 385 553 IPR011990 GO:0005515
Aed7g2358 821 Gene3D Tetratricopeptide repeat domain 607 782 IPR011990 GO:0005515
Aed7g2358 821 MobiDBLite consensus disorder prediction 1 20 - -
Aed7g2358 821 CDD PKc_CLK 64 373 - -
Aed7g2358 821 Pfam PPR repeat family 588 636 IPR002885 -
Aed7g2358 821 Pfam PPR repeat family 489 535 IPR002885 -
Aed7g2358 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Aed7g2358 821 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 446 480 IPR002885 -
Aed7g2358 821 MobiDBLite consensus disorder prediction 43 62 - -
Aed7g2358 821 PANTHER OS05G0439300 PROTEIN 380 487 - -
Aed7g2358 821 PANTHER OS05G0439300 PROTEIN 488 813 - -
Aed7g2358 821 SMART serkin_6 77 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g2358 821 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 488 522 IPR002885 -
Aed7g2358 821 Pfam PPR repeat 448 474 IPR002885 -
Aed7g2358 821 Pfam PPR repeat 663 687 IPR002885 -
Aed7g2358 821 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 488 813 - -
Aed7g2358 821 ProSiteProfiles Protein kinase domain profile. 77 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g2358 821 TIGRFAM PPR: pentatricopeptide repeat domain 490 524 IPR002885 -
Aed7g2358 821 TIGRFAM PPR: pentatricopeptide repeat domain 561 590 IPR002885 -
Aed7g2358 821 TIGRFAM PPR: pentatricopeptide repeat domain 591 624 IPR002885 -
Aed7g2358 821 TIGRFAM PPR: pentatricopeptide repeat domain 448 474 IPR002885 -
Aed7g2358 821 Pfam Protein kinase domain 77 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g2358 821 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 558 588 IPR002885 -
Aed7g2358 821 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 380 487 - -
Aed7g2358 821 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 589 623 IPR002885 -
Aed7g2358 821 SUPERFAMILY Protein kinase-like (PK-like) 64 331 IPR011009 -
Aed7g2358 821 Pfam E motif 706 768 IPR046848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2358 Aed-Chr7 25632647 25638672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2358 391 796 Glycoside Hydrolase AT3G49170 32.518 2.67e-69 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Aed7g2358 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2358 K08287 - gmx:100782453 673.7