Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2342 ATGGAAGGTGAAAGGACAATCCCTGCTGCATCAGATGGGGTGATAGAAGGTGTTCAGAAAATTAGAGCTCTGCATGGGAGGACTACTGGCCCTACAAGGCGCTCTACAAAAGGACAATGGACACCTGAGGAGGACGAGACTTTGCAGCAGGCTGTTCATCGTTTCAAAGGAAAGAACTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAATGCTTGCATAGGTGGCAGAAAGTCTTAAATCCAGAACTTGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATTATTGATTTGGTGAATAGATATGGGCCTAAAAAGTGGTCTACTATCGCACAACACTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTACTATAAATAAGGAAGCATGGACGCAGGAAGAGGAGTTGGCTCTCATACGCGCACATCAGAGTTATGGGAACAAATGGGCAGAATTAGCAAAGTTATTGCCTGGAAGGACAGACAATGCTATAAAAAACCATTGGAATAGTTCTGTAAAAAAAAAATTGGATTCTTACTTGGCATCGGGCATGCTTACTCAGTTACAAAATGTACCACTTGTTGGAAATCCAAATCAACCTACTGCTTCAATCTCTTCGAGGTTTCAGCAGAGTGGAGATGATAATGGTCCTAGGGGGATTGAAGGAGAGGAAGTTTCACAGTGTAGCCAGGAGTCAGCTAATGTTGGTCACTTTTCGTCAGCCAGGGACATGAGCAGTGTTGTTTTACAAACTGGAGAGGAATACAGACCAAGTGAAGAACCTAGTCAAACATCCTGTTCAGAGCCATATTACGTGTCTCTGGATGAAGTAACTGCATCCCTTCAAGACATGGCTGGTCAAGAGATTTGCACTTCTCAATTCATTGAGCAGAAATATTCACACAAACCTAGAAATTCTACAAACGGGGACTGCCACCTTGATTTACTTGACTTGACCAATTATTCCTCACTGGACTTTGGGCAGGAATCATCACAGTTTCAAAATGATTGTGTAGCTCCTAGTGAAAGTCACGACATGGTGAATGTTTCGTTTCAGACTCCGATAGGTGTTAAACCAGAACACATGTTGATGTCTGATGATGAATGTTGCAGAATCCTATTTTCAGAAGCAATAAGTGATGAATGCTTTTCTTCTGGAAATTATAACAATGGTGTAAACATGGTTGACTTGTCAGGATGCACCTCATTTCTTTGTCAGTCATCATTACCATCTGCCCTATCGGTAGTTTCTTCTGCTGGAGATAGGTTGACATATACGGCCGAAGCCAATCAGTTGGTTGGGTCTGAGGATCAGCAGTTTGTCTCAAGAACACAGGACAACATAATTTATGCCAATGACTTATCCAGTTCTCCTCGTATCCATAGGATAGACAACACAGAAATACAAGAGCCACCATCATCAGATGTTGTTAAAGATGATTCAAAACTGGTCCCTGTAAATAGTTTTGGCTGTGGATCAGATGCTAAGCAAATTTCTAATCCAATGGATGAAAAGCCAAATGTGCATACAGAACAGGAGGACACAGGTGCTCTATGTTATGAACCTCCCCGCTTTCCAAGCTTGGACATTCCTTTCTTAAGCTGTGATCTTATACAAACTGGGGGTGATATGCAGCAGGAATTCAGTCCCCTAGGTATCCGCCAATTTATGATGTCTTCTATGAACATGAACTCTCTTACTCCTTTTAGATTATGGGACTCACCTTCTCGGGATGATAGTCCAGATGCTTTGTTAAAAAGTGCAGCTAAAACCTTCACAGGTACACCATCTATATTAAAGAAACGAACCCGCGACCTTTTATCTCCACTATCAGATAAAAGAACTGACAAGAAACTTGAGATTGAAATGACATCAACCTTGATAAGAAACTTTTCCCGATTAGATGTCATGTTTGATGACAATGAGACTCAGGGAGCAGATTTGCCTCCTGCGTCTTCATTGCAAAAGAGGGACTCTGATACCTCTGTTGAAGGTGATAAAGAGAATTGTGGACAAGCTGTTAAAGTGGAACAAGTAGAGGATAAAAATAAGTCTGCAATTTTGGACGACAAAAAATCAGAAGACGATTCATGTGATAATACTTCTCAGAATAAAATTAAGCAGCAACCTCTTGATGTTGATTCTGAGATGACGAATGATGCTAGTGCTGCTGCTGAGATTGTTAATTTGAAAACAGAAAGAGTTCTTACTTTAAGCGCTAGAACTAAAAAAAATCCATGCACAAGGATTAACTCACCATCTGTTTGGGTAAAGGAGCATGAAAGACTTTCAGTTGCTGTTACTTGTGTACAGTCTGTCAGTTCATCAGGCCCAGGAGAGATTTCGGGTGATCAAGCTGGAAACGATGGAGGTCTTGAAACATGTAACATATTTGGTGGAACACCTTTTAGGAAAAGCATCGAGTCGCCTTCAGCATGGAAATCTCCTTGGTTCATCAACACTTTTTTATCCAGCCCCAGGATTGATACTGAAATTACAATTGAGGATTTCGGGTATTTCATGAGCCCTGGTGACAGAAGCTATGATGCTATCGGGTTGATGAAACAGATCAGTGAACAAACTGCCGCTCAATATGCCAGTGCCCAAGAGATTTTGGGAAATGAGACTCCTAAAGCGTTACCAAAAGATGACAGGGATGGAGACCAGGAGAATATCGATCCTCATAATCAGCATGGGAACCATTCTCAGTTGGCTTCAAGTTCTTTGGTGGAGCGACGTGTACTTGACTTCAGCGAATGTGGAACTCCGGTGAAAGGTGATAACAGTAAATCCTCAGCTATGAGCTTCTCAAGCCCTTCGTCGTATTTGTTGAAGGGCTGTAGATAG 2889 0.4164 MEGERTIPAASDGVIEGVQKIRALHGRTTGPTRRSTKGQWTPEEDETLQQAVHRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNRYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPTINKEAWTQEEELALIRAHQSYGNKWAELAKLLPGRTDNAIKNHWNSSVKKKLDSYLASGMLTQLQNVPLVGNPNQPTASISSRFQQSGDDNGPRGIEGEEVSQCSQESANVGHFSSARDMSSVVLQTGEEYRPSEEPSQTSCSEPYYVSLDEVTASLQDMAGQEICTSQFIEQKYSHKPRNSTNGDCHLDLLDLTNYSSLDFGQESSQFQNDCVAPSESHDMVNVSFQTPIGVKPEHMLMSDDECCRILFSEAISDECFSSGNYNNGVNMVDLSGCTSFLCQSSLPSALSVVSSAGDRLTYTAEANQLVGSEDQQFVSRTQDNIIYANDLSSSPRIHRIDNTEIQEPPSSDVVKDDSKLVPVNSFGCGSDAKQISNPMDEKPNVHTEQEDTGALCYEPPRFPSLDIPFLSCDLIQTGGDMQQEFSPLGIRQFMMSSMNMNSLTPFRLWDSPSRDDSPDALLKSAAKTFTGTPSILKKRTRDLLSPLSDKRTDKKLEIEMTSTLIRNFSRLDVMFDDNETQGADLPPASSLQKRDSDTSVEGDKENCGQAVKVEQVEDKNKSAILDDKKSEDDSCDNTSQNKIKQQPLDVDSEMTNDASAAAEIVNLKTERVLTLSARTKKNPCTRINSPSVWVKEHERLSVAVTCVQSVSSSGPGEISGDQAGNDGGLETCNIFGGTPFRKSIESPSAWKSPWFINTFLSSPRIDTEITIEDFGYFMSPGDRSYDAIGLMKQISEQTAAQYASAQEILGNETPKALPKDDRDGDQENIDPHNQHGNHSQLASSSLVERRVLDFSECGTPVKGDNSKSSAMSFSSPSSYLLKGCR 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2342 962 MobiDBLite consensus disorder prediction 239 254 - -
Aed7g2342 962 Gene3D - 89 140 - -
Aed7g2342 962 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Aed7g2342 962 MobiDBLite consensus disorder prediction 934 962 - -
Aed7g2342 962 SMART sant 88 137 IPR001005 -
Aed7g2342 962 SMART sant 140 188 IPR001005 -
Aed7g2342 962 SMART sant 36 85 IPR001005 -
Aed7g2342 962 MobiDBLite consensus disorder prediction 938 956 - -
Aed7g2342 962 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Aed7g2342 962 MobiDBLite consensus disorder prediction 885 920 - -
Aed7g2342 962 MobiDBLite consensus disorder prediction 211 254 - -
Aed7g2342 962 CDD SANT 143 183 IPR001005 -
Aed7g2342 962 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Aed7g2342 962 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Aed7g2342 962 Gene3D - 36 88 - -
Aed7g2342 962 PANTHER MYB PROTEIN-RELATED 785 961 - -
Aed7g2342 962 PANTHER MYB PROTEIN-RELATED 5 739 - -
Aed7g2342 962 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Aed7g2342 962 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Aed7g2342 962 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Aed7g2342 962 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Aed7g2342 962 MobiDBLite consensus disorder prediction 673 715 - -
Aed7g2342 962 MobiDBLite consensus disorder prediction 891 909 - -
Aed7g2342 962 CDD SANT 40 83 IPR001005 -
Aed7g2342 962 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Aed7g2342 962 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Aed7g2342 962 PANTHER TRANSCRIPTION REPRESSOR MYB5 785 961 - -
Aed7g2342 962 PANTHER TRANSCRIPTION REPRESSOR MYB5 5 739 - -
Aed7g2342 962 MobiDBLite consensus disorder prediction 211 227 - -
Aed7g2342 962 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Aed7g2342 962 Gene3D - 142 204 - -
Aed7g2342 962 MobiDBLite consensus disorder prediction 655 728 - -
Aed7g2342 962 CDD SANT 91 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2342 Aed-Chr7 25512699 25518958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2342 15 962 MYB Transcription Factor Family AT4G32730 44.390 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed7g2342 Myb_DNA-binding 2.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2342 - K09420 gmx:100811335 1729.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1004 6 13751645 13762122 Aed7g2342 7 25512699 25518958 PCT