Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2332 ATGGAGCAGAGCGAAAGGGCGTCGGATTTACTAGCTCCGAGGAAATTGGCTCGCCAATTGGATTTCGCGCCCGTTTACGGAGATCCGTCGCACCTGAAACTGCCGCCACAGTCACCGCTTCCGCGGCCGCCGTCGCATTATCCGTTGCAATTACAGTTGGATTTGCATCCGCCGGGGCAACGGCCGTGGTTATATTCAGAGGCACAGGAACAGCCGTGGCTATATTCACCGCGACCGAAGCTAGTTTCGCCGGTTCGACGAATTCCTCACCCCGTGCAGAAGCTTCCGGTGAAGGTGTTGCAAGTGGTAAAGCCAGAGTCTCCTAGATCACAACCTGGATGTAATGTGGAATTGAAGGATGCCACTCCAAAGAAACAGAAACAATGTAACTGCAAAAATTCTAGATGCCTCAAGTTGTACTGTGAGTGCTTTGCAGCTGGGATCTATTGTGATGGCTGCAACTGTGTAAATTGCCATAATAATGTGGATAACGAGGCTGCCAGACAGGAGGCAGTTGGAATAACATTGGAACGCAATCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCCCAAGAACGAAGAGATTCCAAGGAATGTGAAATTCAAGTAATAGGAAAGCACAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTGATGAAAGAAGAGCAATATTTCACAAAGATTATAATCTACTTCAAATCAAACAGGCAGCTAATGCAACCATTAGTGGATTTGTTGGATCATCTGGCTATGGATCCCATATAACACCCAAGAAGAGAAAAATTCAGGAAATGTTTCCTGGAAAGTCAGCCATGGATCAAACTGTTAACATGACTGGTCAATACCAACAGGAAATTGATCCTATGGCTTCATCGCCTTCATCTCTGTCAGATTCCTTTGTTTCTGACCCTTCCAATATAAGAATTTCAGGGTCTTCAAGATCTACATACCGGTCCGTATTGGCAGATGTCCTCCAGCCACAGAATGTGAAGAATCTCTGTTCACTTTTTGTTGTTCTCTCACGAGTAGCTGCAAAGACAAATGCAGAAATGAGAGACAAAGTAGAGCAGCAAACAGAAACTTTGAACTTTGAAGCTTGTATTGCTTCATCAGCTAAATCACTGCAAGAAACTAGAGATGTCCACCAGCCTGTTTGTGATAATCACGTGAATAAAGACGAAGCAGATGCAGTTGATATTGCTAATTATAATAGGCCATTGTCACCAGAAACACTGGCATTGATGTGTGATGAACAAGATGATATGCTTTTTAGAAATAGTTCTGCAAATGGAGTTGCATGCAGCAACACTTTTCAAAACATGGTTCAAAAGTCATTTAATTCTGATGGATACACTGAAGTTTACGGTGAGCAGGAACGGCTTATATTGACCAAGTTCTTGGATGTTCTTCGCGGACTCGTTACTCATGGTAGCATAAAAGAAACAATGTGCTCTTCATCGATCATGAAAGGGGAGAGAAGCAAGAAAGAACCTGCAGACAATGGCAATATTGGTGCTGAAACTAGCGTTGGGAGCGACAAGGGAATTCATAGCAACTGCTTTGCAAATTACCTCATCCCATCGGTTACTAAAATTTTACGGACAAATTATGTCATAACTAATGGACATGGTAATAATGATCTTTCGTTGACCTGA 1746 0.4296 MEQSERASDLLAPRKLARQLDFAPVYGDPSHLKLPPQSPLPRPPSHYPLQLQLDLHPPGQRPWLYSEAQEQPWLYSPRPKLVSPVRRIPHPVQKLPVKVLQVVKPESPRSQPGCNVELKDATPKKQKQCNCKNSRCLKLYCECFAAGIYCDGCNCVNCHNNVDNEAARQEAVGITLERNPNAFRPKIASSPQERRDSKECEIQVIGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSDERRAIFHKDYNLLQIKQAANATISGFVGSSGYGSHITPKKRKIQEMFPGKSAMDQTVNMTGQYQQEIDPMASSPSSLSDSFVSDPSNIRISGSSRSTYRSVLADVLQPQNVKNLCSLFVVLSRVAAKTNAEMRDKVEQQTETLNFEACIASSAKSLQETRDVHQPVCDNHVNKDEADAVDIANYNRPLSPETLALMCDEQDDMLFRNSSANGVACSNTFQNMVQKSFNSDGYTEVYGEQERLILTKFLDVLRGLVTHGSIKETMCSSSIMKGERSKKEPADNGNIGAETSVGSDKGIHSNCFANYLIPSVTKILRTNYVITNGHGNNDLSLT 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2332 581 ProSiteProfiles CRC domain profile. 125 247 IPR005172 -
Aed7g2332 581 MobiDBLite consensus disorder prediction 25 49 - -
Aed7g2332 581 SMART CXC_2 207 248 IPR033467 -
Aed7g2332 581 SMART CXC_2 124 164 IPR033467 -
Aed7g2332 581 PANTHER TESMIN/TSO1-RELATED 1 558 IPR028307 -
Aed7g2332 581 MobiDBLite consensus disorder prediction 517 538 - -
Aed7g2332 581 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 210 244 IPR005172 -
Aed7g2332 581 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 126 161 IPR005172 -
Aed7g2332 581 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2332 Aed-Chr7 25444039 25448860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2332 14 516 CPP Transcription Factor Family AT4G29000 45.455 5.36e-130 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aed7g2332 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2332 - K21776 gmx:100811459 1011.52