Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2314 ATGCCTCACTTCTCTCTTTCTCCTAATATGTATGCTATGTGGAGAGCTGGTGATCTAGTTCAAACTCAGAGGCAGTATGTTCAAGTTGTTAAAGAGTTAAAATTTAGGGATTCATATTTCTTGGTTCTGAAGGCCACCATTATGGCTGTACATACAAAATTCCGTCTTATTACTTACTCAGAAGAGATTGTAGATGGACAGCCTATTTTTGTCTCTTCAAATTGTCTTCCTATGAAGGCTTTGAAATTTGATCCTGCAGGTCATGCTTTTCATTCTGCTGCACTGAAACTTCTTGGTGTTCAGGAAGATAACAATGATTCTGATGATAAAAAAGTGGTTGATGACAAGGAACAGACGTATCTCCCATCTGATTCTTATAGCAGCAAGAGCAAAAAGAAATCTGGTACTGGAGACAAGCAACAAGATCACTATGCACTATTGGATGAGTTTGATGATGAGATTCCCACTGATTGTGCTCCACAAGACTTCTTCAAGGTGTTTGGTCCTGCTTTTATGAGGAATGGGCGGTGGTCGGTTAATCAACCAATTCCATCACTAGGTGATGATAATACTCCATTAAAAGAAGTTGATAATTTCTACAATTTTTGGTACTCCTTTAAAAGCTGGAGGGAGTTTCCTCATGCTGACGAGTTTGATCTTGAGCAAGCTGAATCTAGAGATCACAAGAGGTGGATGGAAAGGCAGAATGCTAAATTGACTGAAAAAGCTAGGAAGGAAGACTATGCACGGATACGCACACTTGTTGATAATGCCTATAAGAGGGACCCCAGAATATTGAGAAGAAAGGACGAAGTAAAAGCTGAGAAACAAAGGAAAAAAGAGGCTAAGTTCCTGGCAAAGAAGTTGCAGGAAGAAGAAGCAGCCAGAATTGCAGAAGAGGAGAGGCAACGGAAAGAGGAGGAAGAGAGACAAGCTGCAGAAGCTGCTTCACAACAGAAGAAGGTGAAAGAGAAAGAGAAAAAGCTCCTGCGGAAGGAGCGAGCACGTCTTCGGACCCTTTCAGGACCTATTTTATCACAACATTTACTTGATATTTCTGATGATGATGTAGAAATGCTTTGCATGTCACTTGATATTGAGCAGATGAGGAGTCTCTGTGAGAAGATGGAAGGCAGACAGGCGTTGTTAGAGAAAGCAAAAGTTTTGAGAGATGCGCTGAGTTCTAAGGAAGAGGTGGTTGATGAGAAAACTAATCCACAAAATGCCAATGGTTCTGTGAAGGCTAATGGCAGCACTTCACAAAGCAGCGTTGAGAAGAAGGAGAAACCTTGGAATAAAGAAGAGATTGATCTATTGAGGAAAGGAATGCAGAAATATCCCAAAGGAACTTCGCGGAGATGGGAGGTTATTTCAGAATACATTGGTACTGGAAGATCTGTTGAAGAAATTATGAAGGCAACTAAAACTGTACTCCTCCAGAAACCTGATTCATCAAAAGCTTTTGACACATTTCTTGAGAAAAGGAAACCTGGTGCACCATCAATTGAGTCTCCACTGACAACCAGAGAAGAATTAGGAGTATCAACCCCTGCCTCATTAACAGATAACATAGAAGACTCTGCCAGCAAAATTACAGATAATCAGAACTCTGCCAACAAAAGTACAGATAATCAGAACTCTGCACCTGCTAATGGTTCAGAACAGGATGTGTGGTCTGCAGTGCAGGAACGAGCACTGGTTCAAGCCTTAAAGGCCTTTCCAAAGGAAACAAGCCAGAGATGGGAGCGAGTTGCAACAGCTGTACCTGGGAAGACTGTGAACCAGTGTAAGAAAAAGTTTGCAATGATGAAGGAGAGTTTCAGGAACAAGAAAACTGCAGTCTGA 1845 0.4146 MPHFSLSPNMYAMWRAGDLVQTQRQYVQVVKELKFRDSYFLVLKATIMAVHTKFRLITYSEEIVDGQPIFVSSNCLPMKALKFDPAGHAFHSAALKLLGVQEDNNDSDDKKVVDDKEQTYLPSDSYSSKSKKKSGTGDKQQDHYALLDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPSLGDDNTPLKEVDNFYNFWYSFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLTEKARKEDYARIRTLVDNAYKRDPRILRRKDEVKAEKQRKKEAKFLAKKLQEEEAARIAEEERQRKEEEERQAAEAASQQKKVKEKEKKLLRKERARLRTLSGPILSQHLLDISDDDVEMLCMSLDIEQMRSLCEKMEGRQALLEKAKVLRDALSSKEEVVDEKTNPQNANGSVKANGSTSQSSVEKKEKPWNKEEIDLLRKGMQKYPKGTSRRWEVISEYIGTGRSVEEIMKATKTVLLQKPDSSKAFDTFLEKRKPGAPSIESPLTTREELGVSTPASLTDNIEDSASKITDNQNSANKSTDNQNSAPANGSEQDVWSAVQERALVQALKAFPKETSQRWERVATAVPGKTVNQCKKKFAMMKESFRNKKTAV 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2314 614 Coils Coil 272 340 - -
Aed7g2314 614 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 148 611 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Aed7g2314 614 MobiDBLite consensus disorder prediction 300 327 - -
Aed7g2314 614 ProSiteProfiles Myb-like domain profile. 558 604 IPR001005 -
Aed7g2314 614 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 48 147 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Aed7g2314 614 SUPERFAMILY Homeodomain-like 556 610 IPR009057 -
Aed7g2314 614 Pfam Myb-like DNA-binding domain 557 602 IPR001005 -
Aed7g2314 614 Gene3D - 422 481 - -
Aed7g2314 614 Gene3D - 550 614 - -
Aed7g2314 614 CDD SANT 558 604 IPR001005 -
Aed7g2314 614 MobiDBLite consensus disorder prediction 404 425 - -
Aed7g2314 614 ProSiteProfiles Myb-like domain profile. 423 478 IPR001005 -
Aed7g2314 614 MobiDBLite consensus disorder prediction 508 556 - -
Aed7g2314 614 SUPERFAMILY Homeodomain-like 425 472 IPR009057 -
Aed7g2314 614 ProSiteProfiles SANT domain profile. 553 608 IPR017884 -
Aed7g2314 614 SMART sant 427 480 IPR001005 -
Aed7g2314 614 SMART sant 554 606 IPR001005 -
Aed7g2314 614 CDD SANT 430 472 IPR001005 -
Aed7g2314 614 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 148 611 - -
Aed7g2314 614 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 48 147 - -
Aed7g2314 614 MobiDBLite consensus disorder prediction 491 556 - -
Aed7g2314 614 MobiDBLite consensus disorder prediction 395 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2314 Aed-Chr7 25327504 25329983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2314 163 266 C2H2 Transcription Factor Family AT1G74250 26.786 1.90e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed7g2314 Myb_DNA-binding 7.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2314 K09522 - gmx:100814414 746.503