Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2309 ATGGAGAAATACGAGCTGGTGAAGGATATAGGATCGGGGAATTTCGGCGTGGCCAGGCTCATGCGTCACAGAGACACCAAGGAGCTTCAAATTTGCCATCGAGACTTGAAGCTGGAGAACACCTTATTGGATGGAAACCCTGCCCCACGCCTCAAAATTTGCGATTTTGGTTATTCTAAGTCATCTCTGCTTCATTCTAGGCCCAAGTCAACGGTGGGAACCCCAGCCTACATTGCACCAGAGGTTCTTTCACGTAGAGAATATGATGGAAAGTTAGCAGATGTATGGTCCTGTGGAGTGACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAAGACCAAGAGGATCCCAAAAATTTCAGGAAAACCATCAATCGAATTATGGCTGTTCAATACAAGATCCCAGACTATGTTCACATATCTGAAGACTGCAGACACCTTCTATCTCGCATTTTTGTGCCAAATGCAACTAGGAGAATCACCATTAAGGAAATCAAGTCCCACCCATGGTTTTTAAAGAACTTGCCCAGAGAATTAACAGAAGTAGCTCAAGCTGCCTACTACAGAAAAGAAAACCCAACCTTTTCTCTTCAGAGTATAGAGGACATCATGAATATTGTTGAGGAGGCCAAGACTCCACCTCCAGCATCCAGGTCAGTTGGAGGATTTGGCTGGGGAGGAGAAGAAGAAGAGGATGAAACAAAAGAGGAAGCAGAGGCTCAGGCTGAAGAAGATGAGTACGAAAAGAGAGTCAAGGAAGCACAGGCTAGCGGGGAATTTCATGTCAGTTAA 795 0.4516 MEKYELVKDIGSGNFGVARLMRHRDTKELQICHRDLKLENTLLDGNPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHISEDCRHLLSRIFVPNATRRITIKEIKSHPWFLKNLPRELTEVAQAAYYRKENPTFSLQSIEDIMNIVEEAKTPPPASRSVGGFGWGGEEEEDETKEEAEAQAEEDEYEKRVKEAQASGEFHVS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2309 264 MobiDBLite consensus disorder prediction 227 244 - -
Aed7g2309 264 ProSitePatterns Serine/Threonine protein kinases active-site signature. 31 43 IPR008271 GO:0004672|GO:0006468
Aed7g2309 264 Coils Coil 229 258 - -
Aed7g2309 264 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 29 258 - -
Aed7g2309 264 PANTHER SERINE/THREONINE KINASE 29 258 - -
Aed7g2309 264 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 29 - -
Aed7g2309 264 SMART serkin_6 4 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g2309 264 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g2309 264 MobiDBLite consensus disorder prediction 212 264 - -
Aed7g2309 264 Pfam Protein kinase domain 30 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g2309 264 SUPERFAMILY Protein kinase-like (PK-like) 2 208 IPR011009 -
Aed7g2309 264 Gene3D Transferase(Phosphotransferase) domain 1 14 180 - -
Aed7g2309 264 PANTHER SERINE/THREONINE KINASE 2 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2309 Aed-Chr7 25297363 25300880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2309 5 192 CBL-interacting serine-threonine protein kinases AT4G30960 38.049 2.25e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aed7g2309 Pkinase 5.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2309 K14498 - gmx:100812259 418.313