Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2303 ATGGAAGGGAACTTCAGTACTAGTTCATACAAAAATCCTCAACTAGGCTCTAGCTTGAAGAAGAAAGATCAGCATAGTCATCTCATTGATCAAGAAGATTATATGTCTCCATCTTTCAATCTGCGGAATATTTCAAAGCTCATTCTTCCCCCACTTGGTGTTTCAAACCAGAATCCAGTTAACTCAAAAGGATGGATCATATCACCAATGGATTCCAGATACAGGTGTTGGGAGAGTTTTATGGTTCTTCTGGTAGCTTATTCTGCATGGGTGTATCCCTTTGAAGTTGCTTTCATGCACAAGTCTTCTAATAAGAAAATCTATATTGTGGACACTGTAGTTGATCTTTTCTTCGGTATTGATATTGTTTTGACATTCTTCGTGGCTTACATTGATCGAACAACTCATCTGCTAGTTCGAGACAAGAAGAAGATTGTAGTGAGATACTTGTCAACATGGTTCGTGATGGATTTTGCATCAACCATACCATATGAGGCAATTGGATATTTGTTCACTGGCAAACAGAAAGTGGGTCTCCCATACTTCCTCTTGGGCCTGCTCAGATTTTGGAGAATCAGACGTGTCAAGCAATACTTCACAAGGCTTGAGAAAGACATCAGGTTCAGCTATTTCTGGGTCCGATGTGCTAGGCTTCTTTCTGTAACACTGTTTTCAATTCATTGTGCTGGGTGTCTGTATTACATGCTAGCTGATAGGTACCCCCACGAAGGAAAGACATGGATAGGAGCAATGAACCCAAACTTCAGAGAGACAAGCCTTTGGATAAGATACATTTCGGCCATGTACTGGTCCATCACTACCATGACCACTGTCGGTTATGGTGACCTCCACGCTGTCAACACCTTAGAAAGGATCTTCATTATTTTCTACATGCTCTTTAACCTTGCCCTTACTGCTTACTTGATTGGTAACATGACTAATCTTGTTGTTGAGGGAACTCGCCGTACAATGGAGTTTAGAAATAGCATTGAATCTGCATCAAACTTCGTGTGCCGAAATCGGTTGCCTCCAAGGTTAAAAGACCAGATCTTGGCTTACATGTGCTTAAGATTTAAGGCAGAGAGCTTGAATCAGAATCAGCTTATTGACCAGCTTCCCAAGTCCATTTGCAAAAGCATCTGCCACCATTTGTTTTTTGCAACTGTTGAGAAAGTCTATCTTTTCAAAGCCGTCTCTAAAGAAATCATTTTATCCCTTGTTGCAAAAATGAAGGCAGAATATATACCACCTAGAGAGGATGTTATCATGCAAAATGAAGCACCAGATGATGTTTACATTATAGTCTCTGGCGAAGTGGAGATCATCGACACTGAAATGGAGAAAGAAAGAATTTTAGGGACTCTACATACTGGGGACATGTTTGGAGAGGTTGGTGCACTTTGTTGTAGACCTCAGAGCTATACCTACAGAACCAAGACTCTCACACAGCTCCTTAGACTCAAGACCAATACTCTTCTAGAAGCAATGCAGATTAAACGAGAAGACAACATACAAATACTCAAAAACTTTCTTCAGCATTTCAAGCAGTTTAATGATCTGAATATCAAAGATTTGATGGTGGAAGAAGAGGACCCTAACATGGATGTGAACTTGTTAACTGTGGCAAGCACTGGCAATGCTGCTTTTCTTGAGGAGCTTCTAAGAGCAGGTTTGGATCCTGACATTGGAGACCCCAAAGGGAAAACACCATTGCACATAGCAGCATCAAATGGGCATGAGGATTGTGTTAAAGTCTTACTCAGGCATGCATGCAACATACATATAAAAGACATGAATGGTAACACGGCAATATGGGATGCTATAGCATCAAAACATTACTCCACATTCCGGATCCTCTTCCAGATTGCTGCTCTCTCTGATCCAAACACAGCAGGCGATCTCCTGTGTACAGCAGCAAAAAGAAACGAACTAACAGTGATGACCGATCTTCTAAAGCAAGGACTAAATGTTGACTCTAAAGATCACCATGATACAGCAGCAATCCAAATTGCCATGGCAGAAAATCACGTGGACATGGTTCAGTTGCTTGTCATGAATGGTTCAGATGTCTCTGATGTGCATAACCATGATTTTTGTTCATCCACCTTGAATGAAATGCTTCAGAAGCGTGAAATTGGGCATCTAATTAATGTAACTGAGGTCATGCCTGCTGGTGAAGTTGTATTTAAGGGGCAGCATGAGCACAGTGGACTAAAGTTTCCAAGAATAAGCATATATAGAGATCATCCTGTAGAAAGAAGACAAAAAGGTTCCATGGAAGCTGGGAAGCTAATAAGGTTGCCCGATTCATTAGAGGAACTCAAAACTACTGCAGGTGAAAAATTTGGGTTTGATGCAAAAGATGCAATGGTGACAAATGAAGAAGGAGCAGAAATAGACTCTATTGATGTGATCAGAGATAATGACAAACTTTATTTTTGTTGA 2445 0.407 MEGNFSTSSYKNPQLGSSLKKKDQHSHLIDQEDYMSPSFNLRNISKLILPPLGVSNQNPVNSKGWIISPMDSRYRCWESFMVLLVAYSAWVYPFEVAFMHKSSNKKIYIVDTVVDLFFGIDIVLTFFVAYIDRTTHLLVRDKKKIVVRYLSTWFVMDFASTIPYEAIGYLFTGKQKVGLPYFLLGLLRFWRIRRVKQYFTRLEKDIRFSYFWVRCARLLSVTLFSIHCAGCLYYMLADRYPHEGKTWIGAMNPNFRETSLWIRYISAMYWSITTMTTVGYGDLHAVNTLERIFIIFYMLFNLALTAYLIGNMTNLVVEGTRRTMEFRNSIESASNFVCRNRLPPRLKDQILAYMCLRFKAESLNQNQLIDQLPKSICKSICHHLFFATVEKVYLFKAVSKEIILSLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEIIDTEMEKERILGTLHTGDMFGEVGALCCRPQSYTYRTKTLTQLLRLKTNTLLEAMQIKREDNIQILKNFLQHFKQFNDLNIKDLMVEEEDPNMDVNLLTVASTGNAAFLEELLRAGLDPDIGDPKGKTPLHIAASNGHEDCVKVLLRHACNIHIKDMNGNTAIWDAIASKHYSTFRILFQIAALSDPNTAGDLLCTAAKRNELTVMTDLLKQGLNVDSKDHHDTAAIQIAMAENHVDMVQLLVMNGSDVSDVHNHDFCSSTLNEMLQKREIGHLINVTEVMPAGEVVFKGQHEHSGLKFPRISIYRDHPVERRQKGSMEAGKLIRLPDSLEELKTTAGEKFGFDAKDAMVTNEEGAEIDSIDVIRDNDKLYFC 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2303 814 PRINTS EAG/ELK/ERG potassium channel family signature 264 281 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed7g2303 814 PRINTS EAG/ELK/ERG potassium channel family signature 122 131 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed7g2303 814 PRINTS EAG/ELK/ERG potassium channel family signature 290 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed7g2303 814 PRINTS EAG/ELK/ERG potassium channel family signature 111 121 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed7g2303 814 PRINTS EAG/ELK/ERG potassium channel family signature 308 317 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed7g2303 814 Gene3D - 75 317 - -
Aed7g2303 814 SUPERFAMILY Ankyrin repeat 501 696 IPR036770 -
Aed7g2303 814 Pfam Ion transport protein 75 323 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed7g2303 814 CDD CAP_ED 394 507 IPR000595 -
Aed7g2303 814 ProSiteProfiles Ankyrin repeat profile. 663 695 IPR002110 GO:0005515
Aed7g2303 814 MobiDBLite consensus disorder prediction 1 22 - -
Aed7g2303 814 ProSiteProfiles Ankyrin repeat region circular profile. 566 597 - -
Aed7g2303 814 MobiDBLite consensus disorder prediction 1 17 - -
Aed7g2303 814 SUPERFAMILY Voltage-gated potassium channels 69 317 - -
Aed7g2303 814 SMART cnmp_10 394 511 IPR000595 -
Aed7g2303 814 Pfam KHA, dimerisation domain of potassium ion channel 742 813 IPR021789 -
Aed7g2303 814 ProSiteProfiles KHA domain profile. 742 814 IPR021789 -
Aed7g2303 814 PANTHER POTASSIUM CHANNEL AKT1 39 813 IPR045319 GO:0005249|GO:0006813
Aed7g2303 814 Gene3D - 535 715 IPR036770 -
Aed7g2303 814 Gene3D Jelly Rolls 361 532 IPR014710 -
Aed7g2303 814 SMART ANK_2a 599 630 IPR002110 GO:0005515
Aed7g2303 814 SMART ANK_2a 533 562 IPR002110 GO:0005515
Aed7g2303 814 SMART ANK_2a 566 595 IPR002110 GO:0005515
Aed7g2303 814 SMART ANK_2a 663 692 IPR002110 GO:0005515
Aed7g2303 814 Pfam Cyclic nucleotide-binding domain 414 497 IPR000595 -
Aed7g2303 814 ProSiteProfiles cAMP/cGMP binding motif profile. 394 513 IPR000595 -
Aed7g2303 814 ProSiteProfiles Ankyrin repeat profile. 566 598 IPR002110 GO:0005515
Aed7g2303 814 Pfam Ankyrin repeats (3 copies) 542 621 IPR002110 GO:0005515
Aed7g2303 814 PANTHER POTASSIUM CHANNEL AKT2/3-LIKE 39 813 - -
Aed7g2303 814 SUPERFAMILY cAMP-binding domain-like 321 513 IPR018490 -
Aed7g2303 814 PRINTS Ankyrin repeat signature 679 693 IPR002110 GO:0005515
Aed7g2303 814 PRINTS Ankyrin repeat signature 567 582 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2303 Aed-Chr7 25245854 25250922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2303 7 571 Ion Channels AT4G22200 71.080 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2303 K21867 - gmx:100798422 1456.81