Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2301 ATGGATTTTGGAAAGATTAATGAAGCACCCAATTCAAAGCTGATTCATGACTTCGACTTGAACATTGCATGTAATGTGGAGGAATTTGATAACATGAAGATAGAGGAGAATGCAATTGCAAATAACGGGGACGTCAAGGACAGTGACACAACTATTCAAGCAAATTCTGCTGCTGCTGAACCCAACAATACTACTGCCTCCTCTGCACCAGCAAGAATCTCACAACATCGTTGTCAGTGCCGTCGCCATCGCCGTGCAGAATCTAAGCTGACTACTGATCCAGATACATTCTGCACTAATTTTTATTGTCAAACAAGAAGAACTCCCATGTGGCGCAAGGGACCTCTGGGACCAAAGACATTGTGCAATGCTTGTGGGCTTCAATACCTTAAGAGGGTGAAGGGTACTGCAGCCCCTTCAGATCATGAAGGTGATGGTCTTGTCCCAGCTGCTCAAACCGTGGAAGCAGGGGATTCAGTTCAAATATCTAAATGA 495 0.4465 MDFGKINEAPNSKLIHDFDLNIACNVEEFDNMKIEENAIANNGDVKDSDTTIQANSAAAEPNNTTASSAPARISQHRCQCRRHRRAESKLTTDPDTFCTNFYCQTRRTPMWRKGPLGPKTLCNACGLQYLKRVKGTAAPSDHEGDGLVPAAQTVEAGDSVQISK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2301 164 Gene3D - 94 143 IPR013088 GO:0006355|GO:0008270
Aed7g2301 164 PANTHER GATA TRANSCRIPTION FACTOR 51 150 - -
Aed7g2301 164 Pfam GATA zinc finger 103 131 IPR000679 GO:0006355|GO:0043565
Aed7g2301 164 SMART GATA_3 92 145 IPR000679 GO:0006355|GO:0043565
Aed7g2301 164 CDD ZnF_GATA 97 141 IPR000679 GO:0006355|GO:0043565
Aed7g2301 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 90 133 - -
Aed7g2301 164 ProSiteProfiles GATA-type zinc finger domain profile. 103 129 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2301 Aed-Chr7 25215201 25215968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2301 98 131 C2C2-Gata Transcription Factor Family AT3G20750 64.706 5.20e-12 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aed7g2301 GATA 1.8e-12 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2301 - - gmx:102663335 166.007