Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2296 ATGGGGAGAAGAAACAGTGGAAGGTCCCTGCAAGAAGCCCTCCGTCGCCGTCTTGAGTCCTGCAAATCCCAATACTCCACCGCCGAAGAATTCGCCAACCATCTCCGTTCAACTTACCCCGATTACCACCGAACCAAGCATCAAACCCTAATTCGATTTGTTCAGGAAGCTCTTAATTCCACCGCCAATATTAATCACACTCCCACACCCAAGCATTGCAGCAACGACGACGACGAAGAACGAGACGCTCGAAGCGCGTCTCGAAAGCGCCGGAAGAAAATCGACGGGAGTGAAGAGAGATTGCAGAGGATGGAAGCGTTACACGTACGAAGGAAGGTGCAGAGTTCTTCCTCAACCTCATCTGCTTCGGAGAGCGAGGACGAAGATGAAGAAGAGACCGTGTCGACGTCAGAGGACGCAATTTATGGGGAGAGGGTGGAGCCTGAGTTTGATTTGATGAAGACAATGCTGCGAAAGTCGTATACGCCGAAGAAGGATGCGGCGACGGAGGAAAAGAACGTTGAATTGGAGGTGGGGAATAGCAGTAAAAGCATTCTTGTGAATGAGGAAATGGTGAACAGCAGTAAGGGCACTACTAGTAATCTTACTCTTGTGAACGAGGGAAGGAAGGAAGTGAAGAGTTTGGTTTCAAACGGGAAGGATGGACCGAGGTTTAAGGATTTGGGTGGGATGAATGAGGTTATAGAAGAATTGAAGATGGAAGTGATTGTGCCTTTGTTCCATCCCCAATTGCCAAGACAGTTAGGAGTCAAGCCAATGGCTGGCATTTTGTTGCATGGACCACCTGGCTGTGGGAAGACCAAACTTGCTCATGCCATAGCTCATGAGACTGCTCTTCCTTTCTATCAGATTTCAGCTACTGAAGTGGTTTCCGGAGTCTCAGGTGCATCTGAAGAAAATATTAGAGAGCTTTTTTCTAAAGCGTACAGGACTGCACCTTCAATTGTCTTTATTGATGAGATTGATGCAATTGCTTCTAAAAGAGAGAATTTGCAGCGTGAGATGGAGAAACGTATTGTGACACAATTAATGACTTGCATGGATCAATCAAATAGGCTTCTTCAACCATCGGACGATTCAGAGAATTCTGATGATCATCATCCTGGCTATGTTCTTGTAATTGGAGCTACGAATAGGCCTGATGCTGTTGACCCTGCCTTGAGAAGGCCTGGTCGGTTTGATCGTGAGATTATCATTGGCAATCCCGATGAATCTGCCAGGGAGCAGATCCTTTCTGTGCTTACTTCTAATCTTAGACTTGAGGGTTTATTTGATCTACAGAAAATAGCCAGGGCTACATCAGGATTTGTTGGTGCTGATTTGGTGGCTCTGGTTGACAAGGCTGGTAATTTGGCAATGAAGAGAATAATTGATGAAAGGAAACGTGAATTATCTCAAGATCTCATGAGCAAGCATGCTGAAGACTGGTGGAGGGAACCTTGGTCAGCCGAAGAAATAGACAAGCTTGCCATCAAAATGTCTGATTTTGAGGAAGCAGCCAAAAAGGTGCAACCTTCATTAAGAAGAGAAGGGTTCTCTACCATTCCTAATGTGAAGTGGGATGATGTTGGAGGGCTTGATCTTTTAAGAAAGGAGTTTGAACGCTACATTGTCAGGCGTATAAAATTTCCTGAAGATTATGAGGAGTTTGGGGTGGATCTCGAGATGGGATTTCTGCTTTATGGACCTCCTGGTTGTGGTAAAACACTGATTGCCAAAGCTGTTGCCAATGAGGCAGGGGCTAATTTTATTCATATTAAGGGACCTGAACTTCTAAATAAATATGTTGGAGAAAGTGAGCTTGAAGTTCGTAAAATGTTTAGCCGTGCAAGGACATGTGCGCCTTGTATACTTTTTTTTGACGAGATTGATGCTTTGACAACCAAACGTGGTAAAGAAGGTGGATGGGTTATTGAACGACTATTGAACCAGTTGCTTATTGAGTTAGATGGCGCAGAGCAACGAAGAGGTGTTTTTGTGATTGGTGCTACAAATAGGCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGTAGGTTTGGTAAACTTCTTTATGTTCCACTTCCAAGCCCAGACGAGCGAGTTTTGATATTGAAAGCTCTATCAAAGAATAAGGCTGTTGATGCCTCTGTGGATTTAAGTACCATAGCAAAAATGGAAGCCTGTGAAAGCCTAAGTGGTGCTGATCTTGCTGCATTGATGAATGAAGCAGCAATGGCTGCTCTTGAAGAGAAATTGACCTCAACTGAGACAACTTGCGATACGGTGACCATCAAGCGTACCATCAAGAGACATCATTTTGAGGCAGCACTGAGTAAAGTGTCTCCGTCTGTGTCAGACAGGCAAAAGCAGTACTATCAGCACTTGTCAGAGAGCTTTAAAGCAGCATGA 2412 0.4507 MGRRNSGRSLQEALRRRLESCKSQYSTAEEFANHLRSTYPDYHRTKHQTLIRFVQEALNSTANINHTPTPKHCSNDDDEERDARSASRKRRKKIDGSEERLQRMEALHVRRKVQSSSSTSSASESEDEDEEETVSTSEDAIYGERVEPEFDLMKTMLRKSYTPKKDAATEEKNVELEVGNSSKSILVNEEMVNSSKGTTSNLTLVNEGRKEVKSLVSNGKDGPRFKDLGGMNEVIEELKMEVIVPLFHPQLPRQLGVKPMAGILLHGPPGCGKTKLAHAIAHETALPFYQISATEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTCMDQSNRLLQPSDDSENSDDHHPGYVLVIGATNRPDAVDPALRRPGRFDREIIIGNPDESAREQILSVLTSNLRLEGLFDLQKIARATSGFVGADLVALVDKAGNLAMKRIIDERKRELSQDLMSKHAEDWWREPWSAEEIDKLAIKMSDFEEAAKKVQPSLRREGFSTIPNVKWDDVGGLDLLRKEFERYIVRRIKFPEDYEEFGVDLEMGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELEVRKMFSRARTCAPCILFFDEIDALTTKRGKEGGWVIERLLNQLLIELDGAEQRRGVFVIGATNRPEVMDRAVLRPGRFGKLLYVPLPSPDERVLILKALSKNKAVDASVDLSTIAKMEACESLSGADLAALMNEAAMAALEEKLTSTETTCDTVTIKRTIKRHHFEAALSKVSPSVSDRQKQYYQHLSESFKAA 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2296 803 CDD AAA 564 695 - -
Aed7g2296 803 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 89 799 - -
Aed7g2296 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 523 800 IPR027417 -
Aed7g2296 803 Gene3D - 523 793 IPR027417 -
Aed7g2296 803 Gene3D - 696 779 - -
Aed7g2296 803 Gene3D - 409 517 - -
Aed7g2296 803 ProSitePatterns AAA-protein family signature. 665 683 IPR003960 GO:0005524|GO:0016887
Aed7g2296 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 517 IPR027417 -
Aed7g2296 803 Pfam AAA+ lid domain 717 755 IPR041569 -
Aed7g2296 803 Pfam AAA+ lid domain 431 466 IPR041569 -
Aed7g2296 803 MobiDBLite consensus disorder prediction 61 147 - -
Aed7g2296 803 MobiDBLite consensus disorder prediction 123 137 - -
Aed7g2296 803 ProSitePatterns AAA-protein family signature. 378 396 IPR003960 GO:0005524|GO:0016887
Aed7g2296 803 PANTHER AAA-FAMILY ATPASE 89 799 - -
Aed7g2296 803 MobiDBLite consensus disorder prediction 71 110 - -
Aed7g2296 803 Gene3D - 205 406 IPR027417 -
Aed7g2296 803 CDD AAA 258 407 - -
Aed7g2296 803 SMART AAA_5 561 697 IPR003593 -
Aed7g2296 803 SMART AAA_5 259 410 IPR003593 -
Aed7g2296 803 Pfam ATPase family associated with various cellular activities (AAA) 263 407 IPR003959 GO:0005524|GO:0016887
Aed7g2296 803 Pfam ATPase family associated with various cellular activities (AAA) 566 694 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2296 Aed-Chr7 25185978 25191622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2296 496 801 Calmodulin-binding Proteins AT3G56690 42.532 4.26e-67 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2296 K14571 - gmx:100809594 1365.13