Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2282 ATGAACGTGCCAAATAACTTGGAGCCTTCACCAGCCACTCAGCTAATGCATAACTTGGCTCTCATTCTCGATCCACCTCTTAGGAGGCAAAACAACAACCATTTGAACACAATCCCACATTGGGAAACAGATAATTATGAAGATGATTCTCAGGCTTGGATAACACTTGGATTTCCTAGGCCTATTTCACCACCACAAAACATGGTTCCTCAGAACAATAATAATATTAGACCAGCTGGGCCACCTCCAGCAACATCTTCAGCCATTGCAGCATTGCCAATGGTGAAACTGACACAAGCCCATTTGGGAAGTGACCCCAATTGCCCAATTTGCAAAGACGAGTTTGAGCTTGATATGGAAGCGAGAGAGTTGCCATGCAAGCATTTCTACCATTCTGACTGCGTCATCCCTTGGCTTCGTATGCACAACACTTGCCCTGTCTGCCGCTACGAGCTGCAAGCTGTTACTATTGCTAATTACCATTTCCAAAATGATGAGAATGACATTAGGTTTGGGTTTGAGGATGCTGCAAGCAGCTTCATCTGGATTTGGAACCAACTCGCTTCGTTCTGGCCTATCCGCTCTTTTCTAGATTGGACACGCTCCTACTTTCATTTCCAACAAAATCATGTTCCTGGTCCTAGAGGTGTTGTGAAGCTGCAGGTAGCTCTTGGTGGCGAGCATTGTTCGATATATAGCTTCATCTCATACTCAAACCTGCTCTATCATCTCATTTCAAGAACACGGATCATGGAATTGAGACACAAGATCTCGAAGGCTACTTCTGGTGCATGTGCTCTCAAGTTATGA 810 0.4481 MNVPNNLEPSPATQLMHNLALILDPPLRRQNNNHLNTIPHWETDNYEDDSQAWITLGFPRPISPPQNMVPQNNNNIRPAGPPPATSSAIAALPMVKLTQAHLGSDPNCPICKDEFELDMEARELPCKHFYHSDCVIPWLRMHNTCPVCRYELQAVTIANYHFQNDENDIRFGFEDAASSFIWIWNQLASFWPIRSFLDWTRSYFHFQQNHVPGPRGVVKLQVALGGEHCSIYSFISYSNLLYHLISRTRIMELRHKISKATSGACALKL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2282 269 SMART ring_2 108 148 IPR001841 -
Aed7g2282 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 155 IPR013083 -
Aed7g2282 269 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 5 201 - -
Aed7g2282 269 ProSiteProfiles Zinc finger RING-type profile. 108 149 IPR001841 -
Aed7g2282 269 CDD RING-H2_RNF126_like 108 149 - -
Aed7g2282 269 Pfam Ring finger domain 107 149 IPR001841 -
Aed7g2282 269 SUPERFAMILY RING/U-box 88 155 - -
Aed7g2282 269 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 5 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2282 Aed-Chr7 25120224 25121101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2282 39 200 C3H Transcription Factor Family AT1G68180 34.637 3.01e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2282 K11982 - gmx:100793656 336.265