Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2275 ATGGAAGCGTTACACGTACGAAGGAAGGTGCAGAGTTCTTCCTCAACCTCATCTGCTTCGGAGAGCGAGGACGAAGATGAAGAAGAGACGGTGTCGACGTCAGAGGACGCAATTTATGGGGAGAGGGTGGAGCCTGAGTTTGATTTGATGAAGACAATGCTGCGAAAGTCGTATACGCCGAAGAAGGATGCGGCGACGGAGGAAAAGAACGTTGAATTGGAGGTGGGGAATAGCAGTAAAAAGCATTCTTGGGTGCATCTGAAGAGAGAAATATTAGAGAGCTTTTTTCTAAAGCGTACAGGACTGCACCTTCAATTGTCTTTATTGATGAGATTGATGCAATTGCTTCTAAAAGAGAGAATTTGCAGCTTGAGATGGAGAAACGACATTATGACACAATTAATGACTTGCATGGATCAATCAAATAGGCTTCTTCAACCATCGGACGATTCAGAGAATTCTGATGATCATCATCCTGGCTATGTTCTTGTAATTGAGCTCACGAATAGGCCTGATGCTGTTGACCCTGCCTTGAGAAGGCCTGGTCGGTTTGATCGTGAGATTATCATTGGCAATCCCGATGAATCTGCCAGGGAGCAGATCCTTTCTGTGCTTACTTCTAATCTTAGACTTGAGGGCTTGATCTTTTTAAGAAAGGAGTTTGAACGCTACATTGTCAGGCGTATAAAATTTCTGAAGATTATGAGGGAGTTTGGGGTGGATCTCGAGATGGGATTTCTGCTTTATGGACCTCCTGGTTGTGGTAAAACACTGATTGCCAAAGCTATTGATGCTTTGACAACCAAACGTGGTAAAGAAGGTGGATGGGTTATTGAAACGACTATTGAACCAGATGGTGAGAGCAACGAAGAGGTGTTTGTGATTGGTGCTACAAATAGGCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGTAGGTTTGGTAAACTTCTTTATGTTCCACTTCCAAGCCCAGACGAGCGAGTTTTGATATTGAAAGCTCTATCAAAGAATAAGGCTGTTGATGCCTCTGTGGATTTAAGTACCATAGCAAAAATGGAAGCCTGTGAAAAGCCTAAAGTGGTGCTGATCTTGCTGCATTGGTTTGTCTCTGCTCTTTATGTGTTGCCTGTTACATCCCTTAACCATTGTTTGCATGTTGTGTATCAGCAATGGCTGCTCTTTGAAGAGAAATTGACCTCAACTGAGACAACTTGCGATACGGTGACCATCAAGCGTACCATCAAGAGACATCATTTTGAGGCAGCACTGAGTAAAGTGTCTCCGTCTGTGTCAGACAGGCAAAAGCAGTACTATCAGCACTTGTCAGAGAGCTTTAAAGCAGCATGA 1350 0.4422 MEALHVRRKVQSSSSTSSASESEDEDEEETVSTSEDAIYGERVEPEFDLMKTMLRKSYTPKKDAATEEKNVELEVGNSSKKHSWVHLKREILESFFLKRTGLHLQLSLLMRLMQLLLKERICSLRWRNDIMTQLMTCMDQSNRLLQPSDDSENSDDHHPGYVLVIELTNRPDAVDPALRRPGRFDREIIIGNPDESAREQILSVLTSNLRLEGLIFLRKEFERYIVRRIKFLKIMREFGVDLEMGFLLYGPPGCGKTLIAKAIDALTTKRGKEGGWVIETTIEPDGESNEEVFVIGATNRPEVMDRAVLRPGRFGKLLYVPLPSPDERVLILKALSKNKAVDASVDLSTIAKMEACEKPKVVLILLHWFVSALYVLPVTSLNHCLHVVYQQWLLFEEKLTSTETTCDTVTIKRTIKRHHFEAALSKVSPSVSDRQKQYYQHLSESFKAA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2275 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 445 IPR027417 -
Aed7g2275 449 PANTHER AAA-FAMILY ATPASE 129 211 - -
Aed7g2275 449 PANTHER AAA-FAMILY ATPASE 213 263 - -
Aed7g2275 449 MobiDBLite consensus disorder prediction 1 43 - -
Aed7g2275 449 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 263 445 - -
Aed7g2275 449 MobiDBLite consensus disorder prediction 20 34 - -
Aed7g2275 449 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 129 211 - -
Aed7g2275 449 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 213 263 - -
Aed7g2275 449 Gene3D - 193 208 - -
Aed7g2275 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 211 IPR027417 -
Aed7g2275 449 Gene3D - 267 439 IPR027417 -
Aed7g2275 449 CDD AAA 245 322 - -
Aed7g2275 449 Pfam ATPase family associated with various cellular activities (AAA) 127 191 IPR003959 GO:0005524|GO:0016887
Aed7g2275 449 Pfam ATPase family associated with various cellular activities (AAA) 283 321 IPR003959 GO:0005524|GO:0016887
Aed7g2275 449 Pfam ATPase family associated with various cellular activities (AAA) 247 263 IPR003959 GO:0005524|GO:0016887
Aed7g2275 449 Gene3D - 213 266 IPR027417 -
Aed7g2275 449 ProSitePatterns AAA-protein family signature. 292 310 IPR003960 GO:0005524|GO:0016887
Aed7g2275 449 Gene3D - 323 425 - -
Aed7g2275 449 PANTHER AAA-FAMILY ATPASE 263 445 - -
Aed7g2275 449 Gene3D - 127 192 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2275 Aed-Chr7 25091424 25095843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2275 235 333 Calmodulin-binding Proteins AT3G56690 31.613 4.20e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2275 K14571 - gmx:100809594 291.967