Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2262 ATGTCTCTGACAGGCCGTCCTCGTATTGTTGTGAACGGGGTCCGAAGAACGAGAACTTTTCACTATTTCTGGTGCCTATATTGCCAGAGAACCGTGCGGATACCCTTTACAAGCCGCAATGATGGTTCTACTACGTGCCCCTATTGCTTCCACCAACTTCGTTATGAGCTTGATATCTCAAGGCCAACAAGGCTTCTCAATCTCATGAACGTGCCAAATAACTTGGAGCCTTCACCAGCCACTCAGCTAATGCATAACTTGGCTCTCATTCTCGATCCACCTCTTAGGAGGCAAAACAACAACCATTTGAACACAATCCCACATTGGGAAACAGATAATTATGAAGATGATTCTCAGGCTTGGATAACACTTGGATTTCCTAGGCCTATTTCACCACCACAAAACATGGTTCCTCAGAACAATAATAATATTAGACCAGCTGGGCCACCTCCAGCAACATCTTCAGCCATTGCAGCATTGCCAATGGTGAAACTGACACAAGCCCATTTGGGAAGTGACCCCAATTGCCCAATTTGCAAAGACGAGTTTGAGCTTGATATGGAAGCGAGAGAGTTGCCATGCAAGCATTTCTACCATTCTGACTGCGTCATCCCTTGGCTTCGTATGCACAACACTTGCCCTGTCTGCCGCTACGAGCTGCAAGCTGTTACTATTGCTAATTACCATTTCCAAAATGATGAGAATGACATTAGGTTTGGGTTTGAGGATGCTGCAAGCAGCTTCATCTGGATTTGGAACCAACTCGCTTCGTTCTGGCCTATCCGCTCTTTTCTAGATTGGACACGCTCCTACTTTCATTTCCAACAAAATCATGTTCCTGGTCCTAGAGGTGTTGTGAAGCTGCAGGTAGCTCTTGGTGGCGAGCATTGTTCGATATATAGCTTCATCTCATACTCAAACCTGCTCTATCATCTCATTTCAAGAACACGGATCATGGAATTGAGACACAAGATCTCGAAGGCTACTTCTGGTGCATGTGCTCTCAAGTTATGA 1014 0.4546 MSLTGRPRIVVNGVRRTRTFHYFWCLYCQRTVRIPFTSRNDGSTTCPYCFHQLRYELDISRPTRLLNLMNVPNNLEPSPATQLMHNLALILDPPLRRQNNNHLNTIPHWETDNYEDDSQAWITLGFPRPISPPQNMVPQNNNNIRPAGPPPATSSAIAALPMVKLTQAHLGSDPNCPICKDEFELDMEARELPCKHFYHSDCVIPWLRMHNTCPVCRYELQAVTIANYHFQNDENDIRFGFEDAASSFIWIWNQLASFWPIRSFLDWTRSYFHFQQNHVPGPRGVVKLQVALGGEHCSIYSFISYSNLLYHLISRTRIMELRHKISKATSGACALKL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2262 337 SMART ring_2 176 216 IPR001841 -
Aed7g2262 337 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 21 269 - -
Aed7g2262 337 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 21 269 - -
Aed7g2262 337 ProSiteProfiles Zinc finger RING-type profile. 176 217 IPR001841 -
Aed7g2262 337 CDD RING-H2_RNF126_like 176 217 - -
Aed7g2262 337 SUPERFAMILY RING/U-box 156 223 - -
Aed7g2262 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 223 IPR013083 -
Aed7g2262 337 Pfam Ring finger domain 175 217 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2262 Aed-Chr7 25024747 25025828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2262 1 268 C3H Transcription Factor Family AT1G68180 33.218 1.21e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2262 K11982 - gmx:100793656 449.514