Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2247 ATGCTGCAACTTATTATTAAGCTGCTGGCCTTAACTTTGATATGGTGGAGCTGCAGTATTAATGTTGAATGTGCAGCTGCAGCCACCACACGTGTAATAAACTCTGGGTGCAGCCCAATCAACGCTACCAGCACAAGTAGCTTCTTTACGAATGTCAATGAGACATTCTCAGAACTGAGTGGACAAATTAGGAACCAAAGCATGCACTTTGGCACATCAAAGAAATCCAGAGGAGAAATCAATACATATACTATGTTTCAATGCAGAAACTATCTCTCCAAAAATGACTGTCTTGCCTGCTTCAACAATGCCTCCATCCAAATCCGAAATATATGCTTAAAAGCCAACGGTGCCAGAATCATCTACAATGACTGCTTCCTCAGGTATGAGAGCGAGAGGTTCTACCAACAGACCAATGAAATTGGCGGTGGGGTGGCATGTGGGAACAAGAGTACAAATGCCACAGGTTTTAGAGCAGTCGGACAACAAGCACTACAAGACCTTCAAAAAGCAACACCAAAAATAAAAGGTTTTTATGCAGCTACTAAGACACAGGTGGATGGTGGTAGTGCAATTTATGCGATTGCACAGTGTGTTGAAACTGCCACAGAGGCTAAGTGTCTGGATTGCATGCAAGTTGGATACAACAACTTACAAAGTTGTCTTCCCAGCACAGATGGAACAGCCTATGATGCTGGCTGTTTTATGAGATACTCCACCAAACCTTTCTTTGCTGATAATCAGACCATTGATATCAGACCCTATTTAAAAGAAGGAGGTTCAAGCAAGAAGTTGGCCATTATAGGTGGTGTGGTAGGAGGTGTTGTTCTTTTCCTTCTGTTGTTTGCTTGGAGATTGTATAGCAAACAAAAGAGGGTTCCCAAAGGTAAGGGATACACGGCACCTGAGTATGCAATGCAAGGTCAATTATCAGAGAAGGCTGATACCTACAGCTATGGTATTGTGGTCCTAGAAATCATAAGTGGTCAAAAGAGTACTAATGTGAATATTAATGATGAAGGTCGTGAGTACCTTCTTCAACGAGTAAGCAAGTTGCTATAA 1062 0.4209 MLQLIIKLLALTLIWWSCSINVECAAAATTRVINSGCSPINATSTSSFFTNVNETFSELSGQIRNQSMHFGTSKKSRGEINTYTMFQCRNYLSKNDCLACFNNASIQIRNICLKANGARIIYNDCFLRYESERFYQQTNEIGGGVACGNKSTNATGFRAVGQQALQDLQKATPKIKGFYAATKTQVDGGSAIYAIAQCVETATEAKCLDCMQVGYNNLQSCLPSTDGTAYDAGCFMRYSTKPFFADNQTIDIRPYLKEGGSSKKLAIIGGVVGGVVLFLLLFAWRLYSKQKRVPKGKGYTAPEYAMQGQLSEKADTYSYGIVVLEIISGQKSTNVNINDEGREYLLQRVSKLL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2247 353 Pfam Protein tyrosine and serine/threonine kinase 297 334 IPR001245 GO:0004672|GO:0006468
Aed7g2247 353 Gene3D - 145 243 IPR038408 -
Aed7g2247 353 Gene3D - 28 134 IPR038408 -
Aed7g2247 353 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Aed7g2247 353 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
Aed7g2247 353 Pfam Salt stress response/antifungal 40 131 IPR002902 -
Aed7g2247 353 Pfam Salt stress response/antifungal 147 240 IPR002902 -
Aed7g2247 353 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 15 296 - -
Aed7g2247 353 Gene3D Transferase(Phosphotransferase) domain 1 275 351 - -
Aed7g2247 353 SUPERFAMILY Protein kinase-like (PK-like) 296 331 IPR011009 -
Aed7g2247 353 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 298 340 - -
Aed7g2247 353 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 296 - -
Aed7g2247 353 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 298 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2247 Aed-Chr7 24933719 24936273 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2247 298 339 Receptor kinase-like Gene Family AT1G70520 50.000 2.04e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed7g2247 Stress-antifung 7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2247 - - gmx:100793189 490.73