Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2244 ATGCTTCAACTTATTATTAGGCTGCTGGCCTTAACTTTGATATGGTGGACCTGCGGTATTAATGTTGAATGTGCAGCTGCAGCCACCACACGTGTAATAAGCTCTGGGTGCAGCCAAATCAACGCTACCAGCACAAGTAGCTTCTTTACGAATGTCAACGAGACATTCTCAGAACTGAGTGGACAAATTAGGAACCAAAACATGCACTTTGGCACATCAAAGAAATCCACAGACGAAATCAATACATATACTTTGTTTCAATGCAGAAACTATCTCTCCAAAAATGATTGTCTTGCTTGTTTCAATAACGCCTCTATCCAAATCCGAAATATATGCTTAAAGGCCAAAGGTGCCAGAATCATCTACAATGACTGCTTCCTTAGGTATGAGAGCGAGAGGTTCTACCAACAGACCAATGAAATTGGTGGGGCAACATGTGGGAACAAGACCTCAAATGCCACAGGTTTTAGAGCAGTTGGACAACAAGCACTACAAGACCTTCAAAACGCAACACCAAAAATAAAAGGTTTTTATGCAGCTACTAAGACACAGGTGGATGGTGGCAGTGCAATTTATGCGATTGCACAGTGTGTTGAAACTGCCACAGAGGCTAACTGTCTGGATTGCATGCAAGTTGGATTCAAAGACTTACAAAGTTGTCTTCCCAGCACAGATGGAACAGCCTATGATGCTGGCTGTTTTATGAGATACTCCACCAAACCTTTCTTTGCTGATAATCAGACCATTGATATCAGACCCTATTTAAAAGAAGGAGGTTCAAGCAAGAAGTTGGCCATTATAGGTGGTGTGGTAGGAGGTGTTGTTCTTTTCCTTCTGTTGTTTGCTTGGAGATTGTATAGCAAACAAAAGAGGGTTCCCAAAGGTAAGGGATACACGGCACCTGAGTATGCAATGCAAGGTCAATTATCAGAGAAGGCTGATACCTACAGCTATGGTATTGTGGTCCTAGAAATCATAAGTGGTCAAAAGAGTACCAATGTGAATATTAATGATGAGGATCGTGAGTACCTTCTTCAACGAGTAAGCAAATTGCTATAA 1059 0.4164 MLQLIIRLLALTLIWWTCGINVECAAAATTRVISSGCSQINATSTSSFFTNVNETFSELSGQIRNQNMHFGTSKKSTDEINTYTLFQCRNYLSKNDCLACFNNASIQIRNICLKAKGARIIYNDCFLRYESERFYQQTNEIGGATCGNKTSNATGFRAVGQQALQDLQNATPKIKGFYAATKTQVDGGSAIYAIAQCVETATEANCLDCMQVGFKDLQSCLPSTDGTAYDAGCFMRYSTKPFFADNQTIDIRPYLKEGGSSKKLAIIGGVVGGVVLFLLLFAWRLYSKQKRVPKGKGYTAPEYAMQGQLSEKADTYSYGIVVLEIISGQKSTNVNINDEDREYLLQRVSKLL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2244 352 Pfam Salt stress response/antifungal 146 239 IPR002902 -
Aed7g2244 352 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Aed7g2244 352 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 295 - -
Aed7g2244 352 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Aed7g2244 352 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 15 295 - -
Aed7g2244 352 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 297 339 - -
Aed7g2244 352 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 297 339 - -
Aed7g2244 352 Pfam Protein tyrosine and serine/threonine kinase 296 339 IPR001245 GO:0004672|GO:0006468
Aed7g2244 352 Gene3D Transferase(Phosphotransferase) domain 1 274 350 - -
Aed7g2244 352 ProSiteProfiles Gnk2-homologous domain profile. 138 242 IPR002902 -
Aed7g2244 352 Gene3D - 28 134 IPR038408 -
Aed7g2244 352 Gene3D - 143 242 IPR038408 -
Aed7g2244 352 SUPERFAMILY Protein kinase-like (PK-like) 295 331 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2244 Aed-Chr7 24916439 24918975 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2244 44 296 Receptor kinase-like Gene Family AT5G40380 27.547 2.55e-21 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed7g2244 Stress-antifung 2.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2244 - - gmx:100793189 451.44