Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed7g2227 | ATGGGTTCTTTGGCTACATCATCTGTTCTGACTAATCATATAATTCCATGGTCTACAACAAATACTGAATCTGCCATGGACTCCAAATTGGGTGTTGTTTTTTATAACATGTACGGAAATACAAACAAAAGACAACTCAGTCTCTCTTTTGCTTGGGATAATTATAAAGTTAAGAGTATTGGTGCAATTAAATCAAGCCAAGATGTCTCTTATTTTCAAACCGAACAACAAGTAGGAACTTGGGAAGAACCGGATGCTGGAAGTGACAGTGAGTGTGATGATGAAGAATATGAAGAAGTCGAAGACGAGAACTTTGGATTTCAAAGTGATTCAGAAGAGGAAGGGATGAAGACTTCAGTTGTTACTGATGTCAATATAACTTCAGGGGACAACTATGAAGAACTTATTAAGAAAGAGATTGAACAGCTTCTGGAACCAGAAGAAAGAGCAATATTGCAGCAGAATGTTACTCCTAACTTGGAAAAAATATCAACTGAAAAATGGAGCCCTCTGCACACTCTTGTGCTATCAATGCAGATGAGTTGCGTGGATAAGCTTCTTGAAAATGGTGTTGATATCGATTTACCTGATAAGGAAGGTCTTACTGCACTTCATAAGGCAATTATAGGTAAAAAAGAAGCTGTGATTAGCCATCTTTTACGGAGAGGTGCAAGTCCTCATGTTAAGGATAAGGATGGGGCCACTCCACTTCATTACGCAGTTCAAGTTGGTGCCAAGATGACTGTGAAATTATTGATCAAGTACAAGGCTGATGTCAATGTTGAAGATAATGAAGGCTGGACTCCCTTGCACGTTGCCATTCAGAGCAGAAATAGAGATATAGCTAAAATTTTGTTAGTAAATGGTGCCGATAAGACAAGGAAAAATAAGGACGGAAAAACACCATTGGATCTAAGCTTATGTTATGGGAAAGATTTCAAGTCTTATGACCTTGCCAAATTACTGAAGACGGTTCCAGCTGACAGTGATCTATAA | 996 | 0.3835 | MGSLATSSVLTNHIIPWSTTNTESAMDSKLGVVFYNMYGNTNKRQLSLSFAWDNYKVKSIGAIKSSQDVSYFQTEQQVGTWEEPDAGSDSECDDEEYEEVEDENFGFQSDSEEEGMKTSVVTDVNITSGDNYEELIKKEIEQLLEPEERAILQQNVTPNLEKISTEKWSPLHTLVLSMQMSCVDKLLENGVDIDLPDKEGLTALHKAIIGKKEAVISHLLRRGASPHVKDKDGATPLHYAVQVGAKMTVKLLIKYKADVNVEDNEGWTPLHVAIQSRNRDIAKILLVNGADKTRKNKDGKTPLDLSLCYGKDFKSYDLAKLLKTVPADSDL | 331 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed7g2227 | 331 | Gene3D | - | 237 | 324 | IPR036770 | - | |
| Aed7g2227 | 331 | ProSiteProfiles | Ankyrin repeat region circular profile. | 265 | 291 | - | - | |
| Aed7g2227 | 331 | PANTHER | ANKYRIN REPEAT AND SOCS BOX PROTEIN 3 | 83 | 324 | - | - | |
| Aed7g2227 | 331 | ProSiteProfiles | Ankyrin repeat profile. | 199 | 231 | IPR002110 | GO:0005515 | |
| Aed7g2227 | 331 | Pfam | Ankyrin repeats (many copies) | 168 | 215 | IPR002110 | GO:0005515 | |
| Aed7g2227 | 331 | ProSiteProfiles | Ankyrin repeat region circular profile. | 199 | 231 | - | - | |
| Aed7g2227 | 331 | SUPERFAMILY | Ankyrin repeat | 158 | 322 | IPR036770 | - | |
| Aed7g2227 | 331 | MobiDBLite | consensus disorder prediction | 77 | 97 | - | - | |
| Aed7g2227 | 331 | ProSiteProfiles | Ankyrin repeat profile. | 232 | 264 | IPR002110 | GO:0005515 | |
| Aed7g2227 | 331 | ProSiteProfiles | Ankyrin repeat profile. | 166 | 198 | IPR002110 | GO:0005515 | |
| Aed7g2227 | 331 | SMART | ANK_2a | 199 | 228 | IPR002110 | GO:0005515 | |
| Aed7g2227 | 331 | SMART | ANK_2a | 298 | 331 | IPR002110 | GO:0005515 | |
| Aed7g2227 | 331 | SMART | ANK_2a | 166 | 195 | IPR002110 | GO:0005515 | |
| Aed7g2227 | 331 | SMART | ANK_2a | 232 | 261 | IPR002110 | GO:0005515 | |
| Aed7g2227 | 331 | SMART | ANK_2a | 265 | 294 | IPR002110 | GO:0005515 | |
| Aed7g2227 | 331 | Gene3D | - | 132 | 236 | IPR036770 | - | |
| Aed7g2227 | 331 | PANTHER | ANKYRIN REPEAT FAMILY PROTEIN | 83 | 324 | - | - | |
| Aed7g2227 | 331 | ProSiteProfiles | Ankyrin repeat profile. | 265 | 297 | IPR002110 | GO:0005515 | |
| Aed7g2227 | 331 | Pfam | Ankyrin repeats (3 copies) | 232 | 296 | IPR002110 | GO:0005515 | |
| Aed7g2227 | 331 | ProSiteProfiles | Ankyrin repeat region circular profile. | 232 | 264 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aed7g2227 | 151 | 306 | Ion Channels | AT2G25600 | 31.410 | 3.13e-11 | 62.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed7g2227 | - | - | gmx:100808064 | 575.474 |