Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2226 ATGGCGATTCAAGATCAAAATGGACTTAACAACAGATCACAGGGTGGTCCTTCAGTAGGAGGTGAAGTATCTTTGAGTTCTGGAGTGCCTTCTGTTTCAAATATTCAACTTAATGACCAGTTTTCTTGCGGGAATGACTATGCTCTGAAGGTTGTAAGGAAACCATATACTATCACCAAACAGAGAGAGAGATGGACAGATGAAGAACATAATATGTTCCTTGAAGCTTTAAAGCTGTATGGACGGGCTTGGCGACGTATTGAAGAACATGTTGGCACAAAGACTGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTCTTCGCGATCCTACTGGGAACAATACAAAAACAGTGGAATCAATTGAAATTCCTCCTCCAAGACCGAAACGAAAGCCAATGCATCCTTACCCTCGTAAACTAGTTGAGAACTCTAGTAAAGAAATTTCAGTCCCAGAACAACTAATGAAGTCTAATTCTCTGAAGTCATCAGATTTTGATCAAGAAAACCAATCTCCAAAATCAGTACTATCAGGAGTTGGTTCAGACAGCCTTGGCTCCTCTGATTCAGACACACCAAATGGAAGTTTGTCGCCCTATTCGTCCATCAGTGGTGTCCATACAAGCGGTTTTACACGTGCTGAACCCAAAACAACATCCGAGGAAGCTGGGATGGACACTTATTCAGCTCATGATGAGAAACCTCTTATGAAACTCAACCTTCCTCCAAATGGATGTGTTTCCATAAAAGAAGACACAGCCGAAGAATCTTCCGGCCGAAGTTTCAAACTCTTTGGAATGACTCTATTTGTAACAGATACATCTTCAACAATTGAGGCATGCAAACCATTACCTCTAAACAACAGCAAGGGGGGTGGAAAATTGGAACTTGTTGGCCACAGGACACCAAGTGAAACATCAGCCATATCCCAGCCAAAGGTGAGAGTGGGACCTAAGACATGTGAGAAAGGGTTTGTGCCATATAAAAGATGCATGGTGGCTGCAGGGAGAGAAAACCAATCTTCATCTGTAGTGACGGCTGATAGTAGAGAAGAACAATGCATCCATCTTTCCATGTAG 1089 0.4233 MAIQDQNGLNNRSQGGPSVGGEVSLSSGVPSVSNIQLNDQFSCGNDYALKVVRKPYTITKQRERWTDEEHNMFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKVLRDPTGNNTKTVESIEIPPPRPKRKPMHPYPRKLVENSSKEISVPEQLMKSNSLKSSDFDQENQSPKSVLSGVGSDSLGSSDSDTPNGSLSPYSSISGVHTSGFTRAEPKTTSEEAGMDTYSAHDEKPLMKLNLPPNGCVSIKEDTAEESSGRSFKLFGMTLFVTDTSSTIEACKPLPLNNSKGGGKLELVGHRTPSETSAISQPKVRVGPKTCEKGFVPYKRCMVAAGRENQSSSVVTADSREEQCIHLSM 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2226 362 MobiDBLite consensus disorder prediction 1 25 - -
Aed7g2226 362 MobiDBLite consensus disorder prediction 150 219 - -
Aed7g2226 362 MobiDBLite consensus disorder prediction 127 145 - -
Aed7g2226 362 Gene3D - 64 110 - -
Aed7g2226 362 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 60 109 IPR006447 GO:0003677
Aed7g2226 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Aed7g2226 362 PANTHER PROTEIN REVEILLE 7-RELATED 31 280 - -
Aed7g2226 362 CDD SANT 64 107 IPR001005 -
Aed7g2226 362 ProSiteProfiles SANT domain profile. 60 111 IPR017884 -
Aed7g2226 362 Pfam Myb-like DNA-binding domain 62 105 IPR001005 -
Aed7g2226 362 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Aed7g2226 362 MobiDBLite consensus disorder prediction 110 227 - -
Aed7g2226 362 SUPERFAMILY Homeodomain-like 56 109 IPR009057 -
Aed7g2226 362 SMART sant 61 109 IPR001005 -
Aed7g2226 362 PANTHER SWI/SNF COMPLEX-RELATED 31 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2226 Aed-Chr7 24761409 24764846 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed7g2226 Myb_DNA-binding 5.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2226 - - gmx:780539 528.865