Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2225 ATGATTTGCTTGCTAACTACTAACTACTACGTACCAGTTTGGGTTTCACTTTCTCCGTCCTTGCCTCGTTGCTTAACAATGTCACAACAACGAACCATTCTTCTATTCACACTCCTTAGTCTCACTTTCACTTCTTCACCAGTCACTTCTTTATACTCTTCTCCGTCACCCCCAGCCGCCCTATTTTCCGAAACTACCCCCGACCCCGCCCAAGAATGGTTACCCGCCCACGCAACTCACTACGCCGCCACCGACGCCGTCGGAGGCGCGTGCGGCTACGGCGACCTCCATAACGGCATTGCCACCGCCGCTCTAAGCGAGGCCCTATTCGGGCGCGGCCAGATCTGCGGTGCCTGCTTCGAGCTCCGGTGCCGCGAGGAGGAGTCCGACTTCGACCGGCGGTGGTGCATCTCCGGCACGACGGTGGGCGTAACCGCCACCAATTTCTGCGCCCCGAACTACGGGTCCGACGCGGAGAGCGTGGGCGGACATTGCAACCCTCCGAAGCAGCATTTCGTGCTTCCGATTGAAGCATTCGAGAAAATCGCAATCTGGAAAGCTGGCATTGGCAACATGCCCGTCGAGTATCGCAGGATAAAGTGTAGAAGAGAAGGGGGGATTCAGTTTACAATTAATGGTTCCGGAATCTTCATTTCGGTACTGATTAGTAATGTGGGTGGCATGGGAGACATTGTTGCAGTGAAGGTGAAGGGTTCACAAAGTGGTTGGCTTCCCATGGGTAGGAATTGGGGTCAGAACTGGCACGTCAATGCGTTACTACAGAACCAACCTCTTTCGTTTGAGGTTACGAGTAGCGATGGGATTACTGTTACATCTTACAATGTTGCTCCCAAGGATTGGTCCTTTGGACAATCTTTTCAAGCCAAGCAATTTCCGTTTTGA 903 0.5305 MICLLTTNYYVPVWVSLSPSLPRCLTMSQQRTILLFTLLSLTFTSSPVTSLYSSPSPPAALFSETTPDPAQEWLPAHATHYAATDAVGGACGYGDLHNGIATAALSEALFGRGQICGACFELRCREEESDFDRRWCISGTTVGVTATNFCAPNYGSDAESVGGHCNPPKQHFVLPIEAFEKIAIWKAGIGNMPVEYRRIKCRREGGIQFTINGSGIFISVLISNVGGMGDIVAVKVKGSQSGWLPMGRNWGQNWHVNALLQNQPLSFEVTSSDGITVTSYNVAPKDWSFGQSFQAKQFPF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2225 300 Gene3D - 206 298 IPR036749 -
Aed7g2225 300 PANTHER EXPANSIN-A15 48 299 IPR002963 GO:0009664
Aed7g2225 300 PRINTS Expansin signature 217 238 IPR002963 GO:0009664
Aed7g2225 300 PRINTS Expansin signature 97 111 IPR002963 GO:0009664
Aed7g2225 300 PRINTS Expansin signature 205 217 IPR002963 GO:0009664
Aed7g2225 300 PRINTS Expansin signature 252 273 IPR002963 GO:0009664
Aed7g2225 300 PRINTS Expansin signature 281 297 IPR002963 GO:0009664
Aed7g2225 300 PRINTS Expansin signature 162 179 IPR002963 GO:0009664
Aed7g2225 300 SMART dpbb_1 102 196 IPR007112 -
Aed7g2225 300 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 216 295 IPR007117 -
Aed7g2225 300 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 88 206 IPR007112 -
Aed7g2225 300 Pfam Lytic transglycolase 102 192 IPR009009 -
Aed7g2225 300 PRINTS Expansin/Lol pI family signature 281 295 IPR007118 GO:0005576
Aed7g2225 300 PRINTS Expansin/Lol pI family signature 72 87 IPR007118 GO:0005576
Aed7g2225 300 PRINTS Expansin/Lol pI family signature 189 205 IPR007118 GO:0005576
Aed7g2225 300 PRINTS Expansin/Lol pI family signature 243 257 IPR007118 GO:0005576
Aed7g2225 300 SUPERFAMILY PHL pollen allergen 203 294 IPR036749 -
Aed7g2225 300 Gene3D - 59 202 IPR036908 -
Aed7g2225 300 Pfam Expansin C-terminal domain 207 284 IPR007117 -
Aed7g2225 300 PANTHER EXPANSIN-A13 48 299 - -
Aed7g2225 300 SUPERFAMILY Barwin-like endoglucanases 72 224 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2225 Aed-Chr7 24759212 24760366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2225 72 298 Expansin Gene Family AT3G03220 71.245 8.49e-118 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2225 - - gmx:100790211 468.388