Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2204 ATGAAACAACAACAACACTTTGATCTTGAAGTGGTGGCCTCAGAAGAATATGAATCTGAAGTTAGCAGCCAGAATATATCTATTCAAGAAACCTATGCAGGTTCTTGCAGTGACAACCTCACCAACTCTTCCAATGTGACAAATCCAATTGAACTTCACCTCCATTCAGATGCTGTCTCCCTTGACTTAACTCTCAACTTCAACAACAATGACACAGTGGTTAGAGATTCAACAGGTGAGAGCAGCAATGATGCTGTCTCTCAAACTCCTTCAGCAGCCAATCCGCGAGTCTTCTCTTGCAATTACTGCAAGAGAAAGTTTTTCAGCTCGCAGGCTCTTGGCGGCCACCAAAATGCACACAAGAGAGAAAGAACAATAGCAAAGAGAGCTATGCGGATGGGGATCTTCTCTGAGAGGTATGCAAGTCTAGCATCTCTCCCTTTTCATGGTTCTTTTAGGAACTTAGGAATAAAGGTACACTCATCACTGCACCATGGTTTTTCGCCAACAATGATGAAGCCGCCTCCTGAGGTGAAAAGCAGTGCAAGATTTGAGCAAGGAGGATATATTGGTCTTCCAATATTCTTGGAGGAGGATGAGGCAGAACTTTTGTGGCAAGGTAGTTACCATCAGGTTCCCTCTAAGGGAGGAAATACTCATCAGAATTTCACACTGAGTGGAGGAAGTTCCAATTTGAGTTTTATTGGTGCGAATCATCCACCACCGGTTGACATAGAGAAGAATTCAACACCTGAGTTGACATTGAAACTTTGA 774 0.4328 MKQQQHFDLEVVASEEYESEVSSQNISIQETYAGSCSDNLTNSSNVTNPIELHLHSDAVSLDLTLNFNNNDTVVRDSTGESSNDAVSQTPSAANPRVFSCNYCKRKFFSSQALGGHQNAHKRERTIAKRAMRMGIFSERYASLASLPFHGSFRNLGIKVHSSLHHGFSPTMMKPPPEVKSSARFEQGGYIGLPIFLEEDEAELLWQGSYHQVPSKGGNTHQNFTLSGGSSNLSFIGANHPPPVDIEKNSTPELTLKL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2204 257 Gene3D Classic Zinc Finger 77 144 - -
Aed7g2204 257 MobiDBLite consensus disorder prediction 238 257 - -
Aed7g2204 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 125 IPR013087 -
Aed7g2204 257 PANTHER ZINC FINGER PROTEIN 3-RELATED 5 257 - -
Aed7g2204 257 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Aed7g2204 257 PANTHER ZINC FINGER PROTEIN JAGGED 5 257 IPR045320 GO:0003700
Aed7g2204 257 SUPERFAMILY beta-beta-alpha zinc fingers 95 125 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2204 Aed-Chr7 24600483 24601256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2204 96 257 C2H2 Transcription Factor Family AT1G66140 47.568 1.52e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed7g2204 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2204 - - gmx:100815175 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2204 7 24600483 24601256 Aed3g2010 3 24163323 24164102 PCT