Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2203 ATGAGGAACCACCACCACTACAACAAGTCCCACATCGCTACTTTCCTATCTTGTTTCCTCTCCATAATTCTCTGCGTGCACTCCCAGCATGACGACGCTTCAGCAATGCTCGCTCTCAGGGACACTCTCAACCCGTCCGAATCTCTCGGGTGGTCCGACCCGGACCCGTGTAAATGGAAACGCGTCCTCTGCTCCGAAGGAACTAAGCGGGTCACCCGCATCCAAATCGGACACCAGGGCCTCCAGGGGACACTCCCCAACGCCACCGTGATGCAAAGCCTGACCCAACTGGAACGCTTGGAGCTCCAATTCAACAACATTTCGGGTCCCCTCCCGAGCCTAAACGGGTTGGGCTCCCTCCAAGTCCTTATTCTCAGTAGCAACCAATTCTCTTCCATCCCCAACGACTTCTTCGCCGGCATGTCGGAGCTTCAAAGCGTCGAGATCGATAACAACCCCTTCAAACCTTGGAAAATCCCCGACAGCATCGTTAACTGCTCTTCCCTCCAAAACTTCTCTGCCAATTCCGCCAACATTGTCGGAACACTCCCTGACTTTTTCTCGACTCTTCCCACGTTGACCCACTTGCACTTGGCCTTCAATAGTCTCCAGGGTGGCTTGCCTTTGACCTTTTCCGGGTCTCAGATTGAGACTCTCTGGTTGAACGGACAAAAGGGTAGTAGTGATACTGATGCTGACAACAATCTAGGTGGCAATGTTGATGTTTTGCAAAACATGACATCGTTGACGCAGGTTTGGTTGCATTCTAATGCTTTTACTGGGCCTCTTCCTGATTTTTCCGGGTTGGAAAGCTTGCAAGATTTGAACTTGAGGGATAACGCCCTCACGGGTCCTGTTCCCGGGTCTTTGGTGGGGTTGAAATCGCTTAAAGTTGTGAACTTGACTAATAACTTGTTTCAGGGGGCAGTGCCTGAGTTTGGTTCTGGGGTTGAAGTAGATTTGGATTTGGGTGATGATTTTAATAGCTTTTGTTTACCACGTGGAGGTAAGTGTGATCCCAGAGTGGAGGTTCTGCTTTCTGTTGTGCGGTTTTTTGGATATCCTAGAAGGTTTGCTGAGAATTGGAAGGGGAATAATCCTTGTGCTGATTGGATTGGGGTTACTTGTAGTGGTGGTGGGGATATTACTGTTGTTAATTTTCAGAAGATGGGTCTTGAGGGTACTATAGCTCCCGAGTTTGCATTGCTCAAATCACTGCAAAAGCTTGTGCTTGCTGATAATAATCTCACTGGGTCGATTCCACAAGAGCTAGCTTCTTTACCTGGGCTTGCTGACTTGAATGTTGCAAACAATCGGCTTTATGGGAAGATCCCAAGTTTTAAGAGCAATGTGGTTCTTACTACAAATGGGAATAAGGATATAGGGAAGGATAATCCCAGCCTAGGGCCAGGATCATCGCATTTAGGTCCTCTATCACCAAATTCAACAGATCCAAATAGAATAGAAGAAAATGGTGGGGTAAGATCTTCACATGTAGGGGTGATTGTGTTTGCTGTGATTGGTGGTGTGGTGTTGGTTTTGGTGATTAGTTTCTTGGTTTTTTGTCTGTTTAGGATGAAGCAGAAACAGTTGAGCAAGGTGCAGAGTCCAAATGCATTGGTTATTCACCCGCGGCATTCTGGATCAGATAATGAAAATGTGAAGATAACAGTTGCAGGTTCAAGTCTTAGTGTTGGTGATGTTAGTGGAATTGGAATGCAAACCATGGCTAACATTACTGGTCGTGTGACAACTAAAGTTGATGTGTTCAGCTTTGGGGTAATATTGATGGAGCTGATAACTGGAAGAAGAGCACTAGATGATACCCAACCAGAGGATAGCATGCACCTTGTAACATGGTTCCGTAGAATGCATGTAAATAAAGACTCATTCCACAAAGCCATTGACCAGACAATTGATCTCAATGAGGAAAAGCTTGCTAGTATTCACACCGTGGCCGAGTTAGCCGGCCACTGCTGTGCAAGGGAGCCATATCAAAGGCCTGATGCGGGTCATGCTGTAAATGTGCTTTCTTCTCTTGTAGAACTCTGGAAACCATCTGATGAAAGTTCTGAAGATGTATATGGCATTGACCTAGACATGTCTTTACCACAAGCATTGAAGAAGTGGCAGGCTTATGAAGGTAGAAGCCAAATGGAGTCTTCTTCTTCTTCACTCCTACCTCATAGCTTGGATAACACTCACACAAGCATACCTACGCGTCCATATGGATTTGCTGAGTCTTTCACATCAGTAGATGGTAGGTGA 2268 0.4643 MRNHHHYNKSHIATFLSCFLSIILCVHSQHDDASAMLALRDTLNPSESLGWSDPDPCKWKRVLCSEGTKRVTRIQIGHQGLQGTLPNATVMQSLTQLERLELQFNNISGPLPSLNGLGSLQVLILSSNQFSSIPNDFFAGMSELQSVEIDNNPFKPWKIPDSIVNCSSLQNFSANSANIVGTLPDFFSTLPTLTHLHLAFNSLQGGLPLTFSGSQIETLWLNGQKGSSDTDADNNLGGNVDVLQNMTSLTQVWLHSNAFTGPLPDFSGLESLQDLNLRDNALTGPVPGSLVGLKSLKVVNLTNNLFQGAVPEFGSGVEVDLDLGDDFNSFCLPRGGKCDPRVEVLLSVVRFFGYPRRFAENWKGNNPCADWIGVTCSGGGDITVVNFQKMGLEGTIAPEFALLKSLQKLVLADNNLTGSIPQELASLPGLADLNVANNRLYGKIPSFKSNVVLTTNGNKDIGKDNPSLGPGSSHLGPLSPNSTDPNRIEENGGVRSSHVGVIVFAVIGGVVLVLVISFLVFCLFRMKQKQLSKVQSPNALVIHPRHSGSDNENVKITVAGSSLSVGDVSGIGMQTMANITGRVTTKVDVFSFGVILMELITGRRALDDTQPEDSMHLVTWFRRMHVNKDSFHKAIDQTIDLNEEKLASIHTVAELAGHCCAREPYQRPDAGHAVNVLSSLVELWKPSDESSEDVYGIDLDMSLPQALKKWQAYEGRSQMESSSSSLLPHSLDNTHTSIPTRPYGFAESFTSVDGR 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2203 755 MobiDBLite consensus disorder prediction 458 491 - -
Aed7g2203 755 Pfam Leucine rich repeat 96 153 IPR001611 GO:0005515
Aed7g2203 755 Pfam Leucine rich repeat 266 305 IPR001611 GO:0005515
Aed7g2203 755 Gene3D Ribonuclease Inhibitor 340 465 IPR032675 -
Aed7g2203 755 Gene3D Ribonuclease Inhibitor 29 336 IPR032675 -
Aed7g2203 755 PANTHER OSJNBA0070M12.3 PROTEIN 578 755 - -
Aed7g2203 755 Gene3D Transferase(Phosphotransferase) domain 1 568 698 - -
Aed7g2203 755 PANTHER RECEPTOR PROTEIN KINASE TMK1 12 571 - -
Aed7g2203 755 SMART LRR_typ_2 403 427 IPR003591 -
Aed7g2203 755 SMART LRR_typ_2 94 116 IPR003591 -
Aed7g2203 755 SMART LRR_typ_2 293 316 IPR003591 -
Aed7g2203 755 SMART LRR_typ_2 269 292 IPR003591 -
Aed7g2203 755 SMART LRR_typ_2 117 140 IPR003591 -
Aed7g2203 755 SMART LRR_typ_2 190 213 IPR003591 -
Aed7g2203 755 MobiDBLite consensus disorder prediction 472 490 - -
Aed7g2203 755 SUPERFAMILY L domain-like 41 454 - -
Aed7g2203 755 ProSiteProfiles Leucine-rich repeat profile. 119 140 IPR001611 GO:0005515
Aed7g2203 755 PANTHER OSJNBA0070M12.3 PROTEIN 12 571 - -
Aed7g2203 755 Pfam Leucine rich repeat N-terminal domain 31 65 IPR013210 -
Aed7g2203 755 Pfam Leucine rich repeat N-terminal domain 342 377 IPR013210 -
Aed7g2203 755 SUPERFAMILY Protein kinase-like (PK-like) 580 685 IPR011009 -
Aed7g2203 755 PANTHER RECEPTOR PROTEIN KINASE TMK1 578 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2203 Aed-Chr7 24586184 24590032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2203 69 470 Receptor kinase-like Gene Family AT5G46330 29.977 4.83e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aed7g2203 LRR_8 8e-07 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2203 - K00924 gmx:100813768 964.911