Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2184 ATGTCCACTGTGAGAGTTCAAGTTTCGGCGTGTGCGTTTTCCGCCACCGTCAACCAGCTTCGCCTCCGCCAAAACGCCGTCCTTTCCTTCAGGAAGAAGCCTCTGAGTCTCAGAGTGGTCTCAATGTCTTCCGTTCCTCCTCCCCAACCCTTCGAAATCGCCGTTAAAGCTTCCGTCACCACACCCAACAGGCTCGGCGACTGCCCTTTTTGCCAAAGGGTGTTGCTGACACTGGAGGAAAAGCATCTACCTTATGACCCCAAGTTGGTGGATTTGACCAACAAGCCAGAATGGTTCCTTAAAGTCAATCCTGATGGTAAAGTTCCCGTCATAAAGTTTGATGAGAAGTGGGTTCCTGATTCAGATGTTATTACTCAAACATTGGAAGAGAAGTATCCCAGCCCACCATTAGTGACCCCACCTGAAAAGGCCACAGCGGGGTCAAAAATCTTTTCTACATTTATTGGATTTCTCAAGAGCAAGGATCCCAATGATGGAACAGAGCAAGCATTACTAAGTGAACTGAGCTCTTTCAATGATTACATCAAGGAAAACGGTCCTTTCATCAACGGCAATGAGATATCTGCAGCTGACCTATCACTTGGACCAAAGTTATACCATTTGGAGATTACTTTGGGGCATTATAAGAAATGGACAGTGCCTGATTCACTTTCCTCTTTGAAGTCTTATACGAAGGCCATTTTCTCAAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGATGTCATTGAAGGTTGGCGTCCTAAAATCCTCATTTCTTCATTTCCTTGCAGGTTCTGCTCAAACAAGACACTCGCTGCTGAGTGTGAAAAGAAAACTTTGAAAGCTCAATTTGTTTGCGAGATGATTTTAGAGGCAATTGAGACACTGAATGAAGGGACTGGTTCGAATAAATCATCAATTTCGAAGTACATAGAAACTACCTACGGTGGATTGCCTCAGGGCCACAAGGTTTTGCTCAATGTGCATCTCGCGAAAATGAGGGACAGTGGTGTTCTAGTGTTTTGGAAGAACAACTACTCCAAGCGTGACCCAAACGCGCCGCCACGCCGTGGCCGTGGCAGGCCGTCCAAGCCCAAGGAGCCTCTGCCTCCGGGCACTGTCTTCTCACCTTCCAGGCCCAGGGGCCGCCCACCAAAGGACCCAAATGAGCCGCCGAAGCCACCTAAGGCCATGACTGGGAGTGGCAGGCCCAGAGGTCGGCCCAGGAAAATGGCCCGGCCCAACGGAGGACTTGGCGAAGCACCACCCTCCGCGGTGAAGCCTGCCACCAGTGGGAGGCCCAGAGGTAGGCCTCCCAAAGCAAAGCCCGTGTTGACTGAAATTAGTGCTTAA 1359 0.496 MSTVRVQVSACAFSATVNQLRLRQNAVLSFRKKPLSLRVVSMSSVPPPQPFEIAVKASVTTPNRLGDCPFCQRVLLTLEEKHLPYDPKLVDLTNKPEWFLKVNPDGKVPVIKFDEKWVPDSDVITQTLEEKYPSPPLVTPPEKATAGSKIFSTFIGFLKSKDPNDGTEQALLSELSSFNDYIKENGPFINGNEISAADLSLGPKLYHLEITLGHYKKWTVPDSLSSLKSYTKAIFSRESFVKTSAQPQDVIEGWRPKILISSFPCRFCSNKTLAAECEKKTLKAQFVCEMILEAIETLNEGTGSNKSSISKYIETTYGGLPQGHKVLLNVHLAKMRDSGVLVFWKNNYSKRDPNAPPRRGRGRPSKPKEPLPPGTVFSPSRPRGRPPKDPNEPPKPPKAMTGSGRPRGRPRKMARPNGGLGEAPPSAVKPATSGRPRGRPPKAKPVLTEISA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2184 452 SFLD Glutathione Transferase (cytosolic) 67 234 IPR040079 -
Aed7g2184 452 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 258 IPR044627 GO:0033355|GO:0045174|GO:0098869
Aed7g2184 452 SMART h15plus2 283 347 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aed7g2184 452 Gene3D Glutaredoxin 50 137 - -
Aed7g2184 452 PRINTS AT-hook-like domain signature 378 389 IPR017956 GO:0003677
Aed7g2184 452 PRINTS AT-hook-like domain signature 402 412 IPR017956 GO:0003677
Aed7g2184 452 PRINTS AT-hook-like domain signature 358 368 IPR017956 GO:0003677
Aed7g2184 452 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 283 353 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aed7g2184 452 SFLD Main (cytGST) 67 234 - -
Aed7g2184 452 SUPERFAMILY Thioredoxin-like 67 134 IPR036249 -
Aed7g2184 452 MobiDBLite consensus disorder prediction 347 452 - -
Aed7g2184 452 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 58 136 IPR004045 -
Aed7g2184 452 Gene3D - 284 356 IPR036388 -
Aed7g2184 452 PANTHER GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC 1 258 - -
Aed7g2184 452 MobiDBLite consensus disorder prediction 367 384 - -
Aed7g2184 452 SUPERFAMILY "Winged helix" DNA-binding domain 287 364 IPR036390 -
Aed7g2184 452 MobiDBLite consensus disorder prediction 352 366 - -
Aed7g2184 452 Pfam linker histone H1 and H5 family 289 345 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aed7g2184 452 SUPERFAMILY GST C-terminal domain-like 131 256 IPR036282 -
Aed7g2184 452 CDD GST_C_DHAR 137 257 - -
Aed7g2184 452 Gene3D - 138 259 - -
Aed7g2184 452 CDD GST_N_family 68 129 - -
Aed7g2184 452 Pfam Glutathione S-transferase, N-terminal domain 67 136 IPR004045 -
Aed7g2184 452 SMART AT_hook_2 358 370 IPR017956 GO:0003677
Aed7g2184 452 SMART AT_hook_2 434 446 IPR017956 GO:0003677
Aed7g2184 452 SMART AT_hook_2 404 416 IPR017956 GO:0003677
Aed7g2184 452 SMART AT_hook_2 380 392 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2184 Aed-Chr7 24379334 24385892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2184 38 259 Glutathione S-transferase Gene Family AT5G16710 72.523 4.12e-122 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2184 K21888 - gmx:732557 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2184 7 24379334 24385892 Aed3g2040 3 24472224 24473823 PCT