Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2183 ATGAAGAGGGATCACCAAGATAGCTGCGGCGGAGGGAGTGTGAAGGGTGAGTGTTCCTCAATGTCGTCGAACGGGAAGGCGAAGATGTGGGAGGTACAACAACAGCAACAGCAAGGAGGGATGGACGAGTCGCTGGCGGCGCTGGGGTACAAGGTGCGTGCTTCCGACATGGCTGACGTGGCACAGAAGCTGGAGCATTTGGAGATGGTGATGGGGTGTGCCCAGGACGAGGGAATTTCCCACCTTGCCTCCGACACAGTTCACTACGACCCCGCGGATCTCTATTCCTGGGTCCAAAGCATGATATCCGAACTCAACCCTGAAGATTCCAACATCAACAACAACAGCATCCTCGATCCATCTTCTCTCTTAATCGACGACGACGACAACAACAACAACACCGCCCCTGTTTTCAACGACGACTCCGAATATGACCTCAGAGCCATTCCTGGCATAGCAGCATACCCTCCTCAAGACAACAACGACAACAACAACAACAACAACAACAACAACCTCGACGAAATCGAAACGGGCAACAACAAGCGGCTCAAGGCTTCTCCAGTTGAATCACAAGACTCGGCGTCTGAGCCCACGCGCCCGGTCGTCCTCGTTGACAGTCAGGAAGCCGGCGTGCGTCTAGTGCACACTATCTTGGCGTGCGCGGAGGCCGTTCAGAAGGAGAATCTCAAGCTCGCCGACGCGCTCGTGAAGCACGTGGGCATACTCGCGGCCTCTCAAGCTGGAGCCATGAGGAAGGTGGCGTCTTACTTCGCCCAAGCCCTGGTGCGTAGAATCTACAGAACCTACCCTGAAGAGACCCTCGACTCCTCCTTCTCCGATGTTCTCCACATGCACTTCTATGAGTCCTGCCCCTATCTCAAATTCGCGCACTTCACCGCGAATCAGGCCATTCTCGAAGCATTCACCAACGCCGGGAGAGTCCACGTCATCGATTTCGGCCTCAAACAGGGGATGCAGTGGCCGGCCCTCATGCAGGCCCTCGCATTGCGCGCTGGTGGGCCCCCTACCTTCCGTTTAACCGGAATCGGGCCCCCACAGCCCGACAACACCGACGCCCTTCAGCAGGTGGGCTGGAAGTTAGCCCAATTAGCCCAAACCATCGGCGTCCAGTTCGAATTCCGCGGATTCGTTTGCAGCAGTCTCGCGGATCTTGACCCGAACATGCTCGAGATCCGACCCGGAGAAGCCGTCGCTGTTAACTCCGTTTTCGAACTCCACCGTATGCTCGCCCGACCCGGATCCTTCGACAAAGTCATGGACACTATCAAGAAAATTAATCCCAAGATTGTCACCATCGTGGAACAAGAAGCGAACCACAACGGCCCGGGTTTCCTGGAACGGTTCACGGAGGCCTTGCATTACTACTCGAGTCTCTTCGACTCGCTGGAGGGTTCGTCCTCCTCGACCGGGTTGGGCTCGCCGAGTCAGGATCTGTTAATGTCCGAGTTATACCTGGGAAGAGAAATATGCAACGTGGTGGCTTACGACGGCCCGGAGCGTGTGGAGCGTCACGAGACATTGAGTCAGTGGAGGGGGAGATTTGGCTCGGCCGGGTTCGACCCGGTTCATCTCGGGTCAAACGCTTTCAAGCAGGCAAGTATGCTACTGGCTCTATTCGCAGGCGGTGACGGGTACAGGGTGGAGGAGAATAACGGCTGCCTTATGCTTGGCTGGCACACTAGGCCACTCATCGCTACCTCCGCTTGGAAGCTTCCCTCCACCTAG 1746 0.5647 MKRDHQDSCGGGSVKGECSSMSSNGKAKMWEVQQQQQQGGMDESLAALGYKVRASDMADVAQKLEHLEMVMGCAQDEGISHLASDTVHYDPADLYSWVQSMISELNPEDSNINNNSILDPSSLLIDDDDNNNNTAPVFNDDSEYDLRAIPGIAAYPPQDNNDNNNNNNNNNLDEIETGNNKRLKASPVESQDSASEPTRPVVLVDSQEAGVRLVHTILACAEAVQKENLKLADALVKHVGILAASQAGAMRKVASYFAQALVRRIYRTYPEETLDSSFSDVLHMHFYESCPYLKFAHFTANQAILEAFTNAGRVHVIDFGLKQGMQWPALMQALALRAGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAQTIGVQFEFRGFVCSSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSFDKVMDTIKKINPKIVTIVEQEANHNGPGFLERFTEALHYYSSLFDSLEGSSSSTGLGSPSQDLLMSELYLGREICNVVAYDGPERVERHETLSQWRGRFGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPST 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2183 581 Pfam Transcriptional regulator DELLA protein N terminal 42 109 IPR021914 -
Aed7g2183 581 Pfam GRAS domain family 213 577 IPR005202 -
Aed7g2183 581 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 578 IPR005202 -
Aed7g2183 581 MobiDBLite consensus disorder prediction 157 175 - -
Aed7g2183 581 MobiDBLite consensus disorder prediction 13 28 - -
Aed7g2183 581 ProSiteProfiles GRAS family profile. 204 577 IPR005202 -
Aed7g2183 581 PANTHER DELLA PROTEIN GAI1-RELATED 21 578 IPR030006 GO:0003712|GO:0005634
Aed7g2183 581 MobiDBLite consensus disorder prediction 1 28 - -
Aed7g2183 581 Gene3D - 40 105 IPR038088 -
Aed7g2183 581 MobiDBLite consensus disorder prediction 152 175 - -
Aed7g2183 581 SMART DELLA_2 42 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2183 Aed-Chr7 24363719 24365464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2183 28 580 GRAS Transcription Factor Family AT1G14920 61.828 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed7g2183 GRAS 6.3e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2183 K14494 - gmx:100799695 953.74