Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2157 ATGACTTTAAGCAAAAGAATACTATGCTTGATCATCACTTTCTCGTACCTAACAAAGCCTTCAAACTCGAAGGAAGACACGTTGCTCCAAGGCCATCAACTTGGATCAACCAACCGTTTGATCTCACCTTCAGATTTATACACACTGCGTTTCTTTCAGCTTGATGGCTCTGATGCCAACACCAAATTCTACCTCGGAATATCAGCCAATAAATACGATTACTATGTTTGGATTGCCAACAGAGACAATCCAATCCATGATGACCCTGGAGTAGTTCTCACTATTGATGAATATGGCAGCCTCAAAATTGTGTCCAGCACCACCACCACTATGATGCTGTATTCGGCTGTTGAAGCAGAAAGGGCAATTATATGGAGTAGTGGAGAATGGAAAAACGGAAGCTTTAGCAACGTGAACTCTTCATTTCAGAAGCTGTTCAATTTCACGTTGTTTTCAAATGAAGGTGATGAAAGTAGTTACTTTGAATATGCTTCAGTTTCGGGTAATTATATCACAATGGGGCCTTTGGGTACTTTGAATCTGAGTGGTGTGACAACCTCGTGCTTTGACAGTGAGGTTGTACCTGGTTGTTCAATGCCACGGCCTCCGAAATGCAGGGAGGACAATGATTTGTACTTGCCAAATTGGAATACCTTTGGGGCAATGTCAAGTGAAGGATTCATATATGATAAAAGAGAGAACTTAACCATTTCTGACTGCTGGATGAAGTGCTTGAAAAATTGCTCGTGTGAAGCTTACACTTTTGCAAATGAGAAGGATGCAACTGGCTGTGAGATATGGACCAGTCACACGTCATATTTTGTTGAGACTACTAATTCCGGTGTTGGCCGTCCCATTTTCTTCTTTCGTACTGGAACCGAACCTAAAGGCAATAAGAAGAGGAGAATATGGATCCCAGGTGCTACAGTTGGAGTTCTTTTCCTAATAATCTTATGCATCACGTGCTCTATTATGTTGAGGAGAAAGCAAAAAGAAAGAGCTGAAAAGCAATATGCCATGAATGGAGTTATTTCAACGAAGATTGATGTATATAGTTTTGGTGTCTTACTTCTTGAAATTGTGAGTGGAAAGAAAAATATCAATGACGATTATTCACTCAATCTTATAGGATATGCATGGCAATTATGGAACAAAGGAGAAGCTCTAAAGCTAGTTGACAGAATGGTGAATGAGTCATCATGCACCCAAATCCAAATCCAAGTACTACGGTGCATTCATATAGGTCTCTTATGCACTCAAGACCAAGCAAAGGACAGACCCACAATGCTTGAGGTCATTTCTTTTCTTTCAAATGAAAATACCCAATTACCTAAACCTATACAACCATCACTTTACACCATCACAAGTGAGAAGAAGGAGGCAGGGCAGAATAAAAGTTGTTCCATCAATGAGATAACAATTTCAATGACATCAGGTAGATAA 1443 0.3999 MTLSKRILCLIITFSYLTKPSNSKEDTLLQGHQLGSTNRLISPSDLYTLRFFQLDGSDANTKFYLGISANKYDYYVWIANRDNPIHDDPGVVLTIDEYGSLKIVSSTTTTMMLYSAVEAERAIIWSSGEWKNGSFSNVNSSFQKLFNFTLFSNEGDESSYFEYASVSGNYITMGPLGTLNLSGVTTSCFDSEVVPGCSMPRPPKCREDNDLYLPNWNTFGAMSSEGFIYDKRENLTISDCWMKCLKNCSCEAYTFANEKDATGCEIWTSHTSYFVETTNSGVGRPIFFFRTGTEPKGNKKRRIWIPGATVGVLFLIILCITCSIMLRRKQKERAEKQYAMNGVISTKIDVYSFGVLLLEIVSGKKNINDDYSLNLIGYAWQLWNKGEALKLVDRMVNESSCTQIQIQVLRCIHIGLLCTQDQAKDRPTMLEVISFLSNENTQLPKPIQPSLYTITSEKKEAGQNKSCSINEITISMTSGR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2157 480 ProSiteProfiles Bulb-type lectin domain profile. 25 163 IPR001480 -
Aed7g2157 480 PANTHER OS01G0783800 PROTEIN 113 334 - -
Aed7g2157 480 SMART blect_4 25 164 IPR001480 -
Aed7g2157 480 Gene3D - 20 165 IPR036426 -
Aed7g2157 480 SUPERFAMILY Protein kinase-like (PK-like) 339 456 IPR011009 -
Aed7g2157 480 ProSiteProfiles PAN/Apple domain profile. 205 278 IPR003609 -
Aed7g2157 480 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 113 334 - -
Aed7g2157 480 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 338 454 - -
Aed7g2157 480 Gene3D Transferase(Phosphotransferase) domain 1 330 452 - -
Aed7g2157 480 Pfam PAN-like domain 233 269 IPR003609 -
Aed7g2157 480 PANTHER OS01G0783800 PROTEIN 338 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2157 Aed-Chr7 24090711 24094306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2157 337 470 Receptor kinase-like Gene Family AT3G45860 43.885 1.29e-26 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed7g2157 PAN_2 2.1e-09 CL0168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2157 - - gmx:100782230 313.153