Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2148 ATGATGGCCGAAACCAAAACACTTGTCCTTGTGCTTCCTCTCTGTGTTTTGACCCTTCTTCTGGCAAAATCTGAGCAACAAGAGTTTTTCTACAACGGGTTTGATGGTGCTGTCTCCAACATAACCTTAAACGGAGGAGCAGTGATTGAGCACAATGGAATACTTCGTTTAACAAACGACACTCAGAGGGTGATTGGGCACGCGTTCTATCCAACCCCAATTCAGTTCAAGCACAAAAACAAAAGCTCCTCCACCGACTCAAAACTTTTCTCCTTTTCCACCGCTTTTGCGTTTGCAATCATCCCACAGTACCCAAAACTGGGTGGCCATGGTTTTGCCTTCACCATTTCGCGCTCCACATCGCTTAGGGACGCATATCCCAGCCAATACTTGGGTCTCCTCAACCCAAACGATGTGGGGAATTTCTCAAATCACTTATTTGCGGTGGAATTCGACACCGTCCAAGACTTCGAATTCGGGGACATCAATGACAACCATGTCGGCATCAACCTCAACAACATGGCATCCAACAAATCCGTCGAAGCTGCATTTTTTTCTCCTGAGAGCTCAACAACCAATAAGCAAAACCTTAGTTTGAAGAGTGGTGAAGTGATTCAAGCATGGGTTGATTACGATCTCCTCAAAGAACCAATTACAACACGACACGTGGTGGGAACACTTGGGTATCTTGCACCTGAGCTCACACGTACGGGGAAGCCTACAACGAGTTCTGATGTGTATGCATTTGGGGCTTTGATGTTGGAGGTGGTGTGTGGGAGGAGGCCTGTTGAGGTGAAGGCGCTGCCGGAGGAGCTTGTGTTGGTGGAGTGGGTGGGAGCGGTGGCGCGTGGGGAAGGTGTTGACGGTGGTGGACCCCAGCTACTTGAGACGGAGTTGGCGCCGCCGTCGCCGGTGCTGGTGGTGGAGGAGGATCGGAAGAAAGAGGGTGGTGAGTTTAAGAGTTATGTTGAATCGTATTCCACGGCGTCGTTTTTTGACGTGGAGAGTGCGTCTGCCTCGTCTCTCTCACTTTCCGGTGGCCGGTAA 1047 0.5014 MMAETKTLVLVLPLCVLTLLLAKSEQQEFFYNGFDGAVSNITLNGGAVIEHNGILRLTNDTQRVIGHAFYPTPIQFKHKNKSSSTDSKLFSFSTAFAFAIIPQYPKLGGHGFAFTISRSTSLRDAYPSQYLGLLNPNDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGINLNNMASNKSVEAAFFSPESSTTNKQNLSLKSGEVIQAWVDYDLLKEPITTRHVVGTLGYLAPELTRTGKPTTSSDVYAFGALMLEVVCGRRPVEVKALPEELVLVEWVGAVARGEGVDGGGPQLLETELAPPSPVLVVEEDRKKEGGEFKSYVESYSTASFFDVESASASSLSLSGGR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2148 348 CDD lectin_legume_LecRK_Arcelin_ConA 28 212 IPR001220 GO:0030246
Aed7g2148 348 Gene3D - 25 216 - -
Aed7g2148 348 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 219 IPR013320 -
Aed7g2148 348 Gene3D Transferase(Phosphotransferase) domain 1 217 264 - -
Aed7g2148 348 PANTHER - 5 221 - -
Aed7g2148 348 PANTHER - 294 348 - -
Aed7g2148 348 PANTHER - 219 280 - -
Aed7g2148 348 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 5 221 - -
Aed7g2148 348 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 294 348 - -
Aed7g2148 348 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 219 280 - -
Aed7g2148 348 SUPERFAMILY Protein kinase-like (PK-like) 218 270 IPR011009 -
Aed7g2148 348 Pfam Protein tyrosine and serine/threonine kinase 226 264 IPR001245 GO:0004672|GO:0006468
Aed7g2148 348 Pfam Legume lectin domain 27 219 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2148 Aed-Chr7 24004376 24006409 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2148 211 278 Receptor kinase-like Gene Family AT3G55550 69.118 1.07e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed7g2148 Lectin_legB 2.9e-52 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2148 - - gmx:100787552 337.421