Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2143 ATGGCTTCAAATTCTTCCTTAAACAATAATAACAACAAAGAACAAGTTCCCTCATGGACAAGAGTGCAGAACAAACAATTTGAGAAGGCACTGGCCTTGTATGATGAAGACACCCCAGATCGGTGGCAAAATATAGCCAAAGAAGTTGGAAATAAATCGGTGGAGGAAGTGAAGAGACACTATGCAATTCTTTTAGAAGATCTTAGTAGAATAGAGTCGGGGCGTGTTCCAATTCCTGGTTATAAGTTCTTAATAAACAACAACATGAATGATCATGCTCATGCAGAGAGGTGA 294 0.3912 MASNSSLNNNNNKEQVPSWTRVQNKQFEKALALYDEDTPDRWQNIAKEVGNKSVEEVKRHYAILLEDLSRIESGRVPIPGYKFLINNNMNDHAHAER 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2143 97 PANTHER PROTEIN RADIALIS-LIKE 3 1 82 - -
Aed7g2143 97 MobiDBLite consensus disorder prediction 1 20 - -
Aed7g2143 97 ProSiteProfiles Myb-like domain profile. 18 65 IPR001005 -
Aed7g2143 97 SMART sant 15 67 IPR001005 -
Aed7g2143 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 82 IPR044636 GO:0003700
Aed7g2143 97 CDD SANT 18 61 IPR001005 -
Aed7g2143 97 Pfam Myb-like DNA-binding domain 18 61 IPR001005 -
Aed7g2143 97 ProSiteProfiles SANT domain profile. 14 61 IPR017884 -
Aed7g2143 97 Gene3D - 11 78 - -
Aed7g2143 97 SUPERFAMILY Homeodomain-like 18 72 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2143 Aed-Chr7 23963472 23963765 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed7g2143 Myb_DNA-binding 3.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2143 - - gmx:100785957 148.288