Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2137 ATGGCGAATAGATGGTGGACTGGGAATGTCGGAATGATAAGAGAGCAAGACTTGATGGAGAACAACAACAGTAACAACAGTAACAACAACAACACTACTATTACTCCGACGAATAGCAGCAACAGCAACAATAACGCCAACACCAACACGACCGAAGAAGAGGTGAGCAGGGACAACGGTGAGGACCTGAACCAAAACCTCGGCAGCCACGAAGTGTCGGAGCCCGGAAGCAGTGGTCGGAGGCCACGTGGCAGGCCACCGGGGTCGAAGAACAAAGCCAAGCCGCCCATAGTCATAACCAAGGAAAGCCCCAACGCGCTCCGGAGCCACGTGATGGAAATCGCCTCCGGAAGCGACGTCGCCGAGAGCATCGCCGCCTTCGCCAACCGCCGCCACCGCGGGGTCGCGGTCCTCAGCGGGAGTGGCATTGTTACCAACGTCACTCTCCGCCAGCCCGCCGCCCCCACCGGCGTCATTACCCTCCACGGAAGGTTCGAGATACTCTCCCTCTCGGGAGCCTTTTTGCCGGCCCCTTCGCCCCCCGGCGCCACAGGGCTAACTGTCTACTTGGCCGGCGGGCAGGGACAGGTTGTCGGTGGCGCCGTCGCGGGACCGCTCGTGGCCTCCGGGCCGTTAGTTACACCCATACAAAGCACTGGAAATGTGTACTTGTATTTGTATAGTAAAAAGCCTGTCTAA 699 0.588 MANRWWTGNVGMIREQDLMENNNSNNSNNNNTTITPTNSSNSNNNANTNTTEEEVSRDNGEDLNQNLGSHEVSEPGSSGRRPRGRPPGSKNKAKPPIVITKESPNALRSHVMEIASGSDVAESIAAFANRRHRGVAVLSGSGIVTNVTLRQPAAPTGVITLHGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGAVAGPLVASGPLVTPIQSTGNVYLYLYSKKPV 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2137 232 PIRSF ESCAROLA 13 224 IPR014476 GO:0003680
Aed7g2137 232 MobiDBLite consensus disorder prediction 20 53 - -
Aed7g2137 232 ProSiteProfiles PPC domain profile profile. 104 232 IPR005175 -
Aed7g2137 232 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 213 IPR014476 GO:0003680
Aed7g2137 232 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 221 - -
Aed7g2137 232 MobiDBLite consensus disorder prediction 20 97 - -
Aed7g2137 232 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 213 - -
Aed7g2137 232 Pfam Plants and Prokaryotes Conserved (PCC) domain 108 216 IPR005175 -
Aed7g2137 232 Gene3D - 107 225 - -
Aed7g2137 232 CDD DUF296 108 190 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2137 Aed-Chr7 23920770 23924262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2137 62 221 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 60.625 3.78e-58 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2137 - - gmx:102667174 303.523