Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2128 ATGGCTGGAATTTGCTGTGGTGTGGTTGGAGAAAGTGACACTACGGCTCCACCCTCCAGGCGCCGGAGTTTGGACATCTTACCGATAAAATACATCGCTGACATGGCCGTGCCGCCGCCGTCTGAGGGTTCACGGAAACGTCCCAAGCTGGATCTCGGGGGCTGCGATAATAACGAACTTGACAATTGCGACGACGAATCAACTGGACACGAGGTCACTAACAAGGATTCCAAAGTGGACAACGACAACAACGACGACGACGTCGTTTCCGAAACGAAAACTGTAACGGTTGAGGATTCTTCAGGAGTTGACGAGTGTCCCAAGTTTGGCGTGACGTCCGTTTGCGGCAGGAGAAGAGACATGGAAGATTCCGTTTCGGTGAGGCCTTGCTTCTTCCAAGGCTTCCACTACTTCGGCGTTTTCGACGGTCATGGTTGCTCTCATGTTGCGACTATGTGCAAGGAGCGGCTACACGAAATTGTGAATGAAGAAATTGGCAGCGCGCTCGAGAATTTGGAGTGGAAACTGACTATGGAGAACGGATTCGCTCGCATGGACGACGAGGTTACTCGCCGGAGCCAGACCAACCTGACCTTCTCCTGCAGGTGCGAGCTCCAGACTCCTCACTGCGACGCCGTTGGATCCACCGCCGTCATCGCCGTCATCACACCGGATAAAATCGTCGTCTCGAACTGCGGCGACTCCCGCGCCGTCCTCTGCCGGAACGGCCTCGCCATCCCTCTGTCCTCCGATCACAAACCGGATCGACCCGACGAATTGCTCCGAGTCCAATCCAAGGGAGGGCGCGTGATTTACTGGGACGGCCCTAGAGTGCTTGGTGTGTTAGCCATGTCTCGTGCCATAGGTGACAATTATCTGAAGCCATACGTGATTTCCGAACCGGAGGTGACGGTGACGGAGCGGATGGAGGAGGATGAGTGTTTGATACTGGCGAGTGATGGGTTGTGGGATGTGGTATCGAATGAAACCGCATGTGGGGTGGTGAGGATGTGCCTTAAGGCGCAGAAGCAGCCGTCGCCGCCAGGGTCTCCGGGGAGTGACTTGGCGGCGGACGGTTCCGACAGGGCTTGCTCCGATGCGTCGATTCTGTTGACCAAGTTGGCGTTGGCAAGGCACAGTTCGGATAATGTGAGCGTGGTGGTTGTTGATTTGAAGAGAGACAAACGACAATCATCCAATTCCAACAACGTTAATTAA 1218 0.5493 MAGICCGVVGESDTTAPPSRRRSLDILPIKYIADMAVPPPSEGSRKRPKLDLGGCDNNELDNCDDESTGHEVTNKDSKVDNDNNDDDVVSETKTVTVEDSSGVDECPKFGVTSVCGRRRDMEDSVSVRPCFFQGFHYFGVFDGHGCSHVATMCKERLHEIVNEEIGSALENLEWKLTMENGFARMDDEVTRRSQTNLTFSCRCELQTPHCDAVGSTAVIAVITPDKIVVSNCGDSRAVLCRNGLAIPLSSDHKPDRPDELLRVQSKGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERMEEDECLILASDGLWDVVSNETACGVVRMCLKAQKQPSPPGSPGSDLAADGSDRACSDASILLTKLALARHSSDNVSVVVVDLKRDKRQSSNSNNVN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2128 405 CDD PP2Cc 108 340 IPR001932 -
Aed7g2128 405 Gene3D - 103 401 IPR036457 -
Aed7g2128 405 MobiDBLite consensus disorder prediction 63 87 - -
Aed7g2128 405 ProSiteProfiles PPM-type phosphatase domain profile. 108 391 IPR001932 -
Aed7g2128 405 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169
Aed7g2128 405 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 21 395 - -
Aed7g2128 405 MobiDBLite consensus disorder prediction 1 21 - -
Aed7g2128 405 PANTHER ALPHABET, ISOFORM E-RELATED 21 395 - -
Aed7g2128 405 Pfam Protein phosphatase 2C 109 383 IPR001932 -
Aed7g2128 405 MobiDBLite consensus disorder prediction 36 87 - -
Aed7g2128 405 SMART PP2C_4 96 389 IPR001932 -
Aed7g2128 405 SUPERFAMILY PP2C-like 106 392 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2128 Aed-Chr7 23814445 23816701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2128 1 366 PP2C-type Phosphatase Gene Family AT3G11410 57.254 1.86e-141 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2128 K14497 - gmx:100776356 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2128 7 23814445 23816701 Aed3g2092 3 24854638 24856750 PCT